MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-430-P9a

Family name MIR-430 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-430-P1  Pab-Mir-430-P2  Pab-Mir-430-P3  Pab-Mir-430-P4  Pab-Mir-430-P5  Pab-Mir-430-P6  Pab-Mir-430-P7  Pab-Mir-430-P8  Pab-Mir-430-P9b  Pab-Mir-430-P10  Pab-Mir-430-P11  Pab-Mir-430-P12a  Pab-Mir-430-P12b  Pab-Mir-430-P13  Pab-Mir-430-P14  Pab-Mir-430-P15  Pab-Mir-430-P16  Pab-Mir-430-P17  Pab-Mir-430-P18  Pab-Mir-430-P19  Pab-Mir-430-P20  Pab-Mir-430-P21  Pab-Mir-430-P22  Pab-Mir-430-P23  Pab-Mir-430-P24  Pab-Mir-430-P27  Pab-Mir-430-P28  Pab-Mir-430-P29a  Pab-Mir-430-P29b  Pab-Mir-430-P29c  Pab-Mir-430-P30  Pab-Mir-430-P31a  Pab-Mir-430-P31b  Pab-Mir-430-P32  Pab-Mir-430-P33a  Pab-Mir-430-P33b  Pab-Mir-430-P34a  Pab-Mir-430-P34b  Pab-Mir-430-P36  Pab-Mir-430-P37a  Pab-Mir-430-P37b  Pab-Mir-430-P37c  Pab-Mir-430-P38  Pab-Mir-430-P39  Pab-Mir-430-P40a  Pab-Mir-430-P40b  Pab-Mir-430-P41a  Pab-Mir-430-P41b 
Orthologues Cja-Mir-430-P9  Hsa-Mir-430-P9  Mml-Mir-430-P9  Xla-Mir-430-o9 
Node of Origin (locus) P. abelii
Node of Origin (family) Vertebrata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054699.2: 60048466-60048521 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P9a)		 Mir-430-P8 CM054699.2: 60047022-60047079 [+] UCSC Ensembl
Mir-430-P9a CM054699.2: 60048466-60048521 [+] UCSC Ensembl
Mir-430-P9b CM054699.2: 60048466-60048521 [+] UCSC Ensembl
Mir-430-P10 CM054699.2: 60050689-60050748 [+] UCSC Ensembl
Mir-430-P11 CM054699.2: 60052166-60052226 [+] UCSC Ensembl
Mir-430-P12a CM054699.2: 60056117-60056175 [+] UCSC Ensembl
Mir-430-P13 CM054699.2: 60057060-60057121 [+] UCSC Ensembl
Mir-430-P14 CM054699.2: 60059251-60059311 [+] UCSC Ensembl
Mir-430-P12b CM054699.2: 60062389-60062447 [+] UCSC Ensembl
Mir-430-P15 CM054699.2: 60063854-60063910 [+] UCSC Ensembl
Mir-430-P16 CM054699.2: 60065871-60065929 [+] UCSC Ensembl
Mir-430-P17 CM054699.2: 60068244-60068302 [+] UCSC Ensembl
Mir-430-P18 CM054699.2: 60071752-60071810 [+] UCSC Ensembl
Mir-430-P19 CM054699.2: 60072570-60072629 [+] UCSC Ensembl
Mir-430-P20 CM054699.2: 60074951-60075010 [+] UCSC Ensembl
Mir-430-P21 CM054699.2: 60075801-60075859 [+] UCSC Ensembl
Mir-430-P23 CM054699.2: 60078632-60078692 [+] UCSC Ensembl
Mir-430-P24 CM054699.2: 60080167-60080225 [+] UCSC Ensembl
Mir-430-P22 CM054699.2: 60083737-60083795 [+] UCSC Ensembl
Mir-430-P27 CM054699.2: 60086239-60086297 [+] UCSC Ensembl
Mir-430-P28 CM054699.2: 60088126-60088184 [+] UCSC Ensembl
Mir-430-P29a CM054699.2: 60089389-60089449 [+] UCSC Ensembl
Mir-430-P30 CM054699.2: 60090468-60090529 [+] UCSC Ensembl
Mir-430-P31a CM054699.2: 60093779-60093844 [+] UCSC Ensembl
Mir-430-P32 CM054699.2: 60095726-60095785 [+] UCSC Ensembl
Mir-430-P29b CM054699.2: 60096688-60096746 [+] UCSC Ensembl
Mir-430-P33a CM054699.2: 60097783-60097842 [+] UCSC Ensembl
Seed CAAAACU
Precursor
(pre-Mir +30nt flank)		 
AAGUUAGACAUGACAUUCAGACUGAGGUCCUCAAAACUGAGGGGCAUUUUCUGUGGUUUGAAAGGAAAGUGCACCCAGUUUUGGGGAUGUCAAUUGUGAAUACUCAUCAUAACCCA
Get precursor sequence
Structure
        10        20          30        40        50        
AAGUUAGACAUGACAUUCAGAC--|  G             A  G         GUGGU 
                        UGA GUCCUCAAAACUG GG GCAUUUUCU     \
                        ACU UAGGGGUUUUGAC CC CGUGAAAGG     U
ACCCAAUACUACUCAUAAGUGUUA^  G             -  A         AAAGU 
    110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-430-P9a_5p (predicted)
mirBase accessionNone
Sequence 
0- UCAAAACUGAGGGGCAUUUUCU -22
Get sequence
Star sequence

Pab-Mir-430-P9a_3p* (predicted)
mirBase accessionNone
Sequence 
35- AAAGUGCACCCAGUUUUGGGG -56
Get sequence