Mir-335

MirGeneDB ID

Ocu-Mir-335

Family name

MIR-335 (all species)

Species

Rabbit (Oryctolagus cuniculus)

MiRBase ID

ocu-mir-335

Paralogues

Orthologues

Bta-Mir-335 Cfa-Mir-335 Cja-Mir-335 Cpo-Mir-335 Dno-Mir-335 Eca-Mir-335 Ete-Mir-335 Hsa-Mir-335 Laf-Mir-335 Mml-Mir-335 Mmr-Mir-335 Mmu-Mir-335 Pab-Mir-335 Rno-Mir-335

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(oryCun2_add)

chr7: 14144944-14145001 [-] UCSC Ensembl

Seed

CAAGAGC

Precursor
(pre-Mir +30nt flank)

AGAUUGGAAAAGAAUUCUUUUGGGCGGGAGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUGCUAUAGUCGGUCAAGUAAG

Get precursor sequence

Structure

        10        20          30        40        50        
AGAUUGGAAAAGAAUUCUUU--|   C  GA    A         C        UUUGU 
                      UGGG GG  GUCA GAGCAAUAA GAAAAAUG     C
                      ACUC CC  CAGU CUCGUUAUU CUUUUUGC     A
GAAUGAACUGGCUGAUAUCGUU^   U  UC    C         A        CAAAU 
      110       100        90        80        70        60