MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-335

Family name MIR-335 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Cpo-Mir-335  Dno-Mir-335  Eca-Mir-335  Hsa-Mir-335  Laf-Mir-335  Mml-Mir-335  Mmr-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980321: 23378815-23378872 [+] UCSC
Seed CAAGAGC
Precursor
(pre-Mir +30nt flank)		 
GGCUGGGGGAAAGACUGCUUUGGGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCCCAAGGGCUCGCUGCGGUUGCGUGA
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Structure
        10          20        30        40        50        
GGCUGGGGGAAAGACUG--|      C        A         C        UUUGU 
                   CUUUGGG GGGGGUCA GAGCAAUAA GAAAAAUG     C
                   GGAACCC CCUCCAGU CUCGUUAUU CUUUUUGC     A
AGUGCGUUGGCGUCGCUCG^      U        C         A        CAAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ete-Mir-335_5p
mirBase accessionNone
Sequence 
0- UCAAGAGCAAUAACGAAAAAUG -22
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Star sequence

Ete-Mir-335_3p*
mirBase accessionNone
Sequence 
36- UUUUUCAUUAUUGCUCCUGACC -58
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