MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-335

Family name MIR-335 (all species)
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-335
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Cpo-Mir-335  Eca-Mir-335  Ete-Mir-335  Hsa-Mir-335  Laf-Mir-335  Mml-Mir-335  Mmr-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH567583: 27016-27073 [-] UCSC Ensembl
Seed CAAGAGC
Precursor
(pre-Mir +30nt flank)
AAAAUUGGAAAGAUUUUUUUUGGGCGGGGAUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUUCUCUCAUUUGCUGUAUUCUGUGAAGUGA
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Structure
        10        20          30        40        50        
AAAAUUGGAAAGAUUUUUUU--|   C    A   A         C        UUUGU 
                      UGGG GGGG UCA GAGCAAUAA GAAAAAUG     C
                      ACUC CUUC AGU CUCGUUAUU CUUUUUGC     A
AGUGAAGUGUCUUAUGUCGUUU^   U    C   C         A        CAAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Dno-Mir-335_5p

mirBase accessionMIMAT0047815
Sequence
0- UCAAGAGCAAUAACGAAAAAUG -22
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Co-mature sequence

Dno-Mir-335_3p

mirBase accessionMIMAT0047816
Sequence
36- UUUUUCAUUAUUGCUCCUGACC -58
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