MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-335

Family name MIR-335 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-335
Paralogues
Orthologues Bta-Mir-335  Cfa-Mir-335  Cja-Mir-335  Cpo-Mir-335  Dno-Mir-335  Ete-Mir-335  Hsa-Mir-335  Laf-Mir-335  Mml-Mir-335  Mmr-Mir-335  Mmu-Mir-335  Ocu-Mir-335  Pab-Mir-335  Rno-Mir-335 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009151.1: 85156076-85156133 [+] UCSC Ensembl
Seed CAAGAGC
Precursor
(pre-Mir +30nt flank)		 
AGAUUGGGAAAGAUUUCUUUUGAGCGGGGGUCAAGAGCAAUAACGAAAAAUGUUUGUCAUAAACCGUUUUUCAUUAUUGCUCCUGACCUCCUCUCAUUUGCUAUAUCCAAUUAAGUAA
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Structure
        10        20          30        40        50        
AGAUUGGGAAAGAUUUCUUU--|   C        A         C        UUUGU 
                      UGAG GGGGGUCA GAGCAAUAA GAAAAAUG     C
                      ACUC CCUCCAGU CUCGUUAUU CUUUUUGC     A
AAUGAAUUAACCUAUAUCGUUU^   U        C         A        CAAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-335_5p
mirBase accessionMIMAT0012942
Sequence 
0- UCAAGAGCAAUAACGAAAAAUG -22
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Star sequence

Eca-Mir-335_3p*
mirBase accessionNone
Sequence 
36- UUUUUCAUUAUUGCUCCUGACC -58
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