MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-370

Family name MIR-370 (all species)
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-370  Cfa-Mir-370  Cja-Mir-370  Cpo-Mir-370  Eca-Mir-370  Hsa-Mir-370  Mml-Mir-370  Mmu-Mir-370  Ocu-Mir-370  Pab-Mir-370  Rno-Mir-370 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007663.1: 12611252-12611308 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-370)
Mir-493 CM007663.1: 12574249-12574311 [+] UCSC Ensembl
Mir-337-v1 CM007663.1: 12577986-12578046 [+] UCSC Ensembl
Mir-337-v2 CM007663.1: 12577986-12578046 [+] UCSC Ensembl
Mir-431 CM007663.1: 12583662-12583725 [+] UCSC Ensembl
Mir-433 CM007663.1: 12584521-12584594 [+] UCSC Ensembl
Mir-127 CM007663.1: 12585625-12585680 [+] UCSC Ensembl
Mir-432 CM007663.1: 12587123-12587191 [+] UCSC Ensembl
Mir-136-v2 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Mir-136-v1 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Mir-370 CM007663.1: 12611252-12611308 [+] UCSC Ensembl
Seed CCUGCUG
Precursor
(pre-Mir +30nt flank)
CGCACAAGUCGGGGCACAAGACAGAGAGGCCAGGUCACGUCCCUGCAGUUACACAGCUCAUGAGUGCCUGCUGGGGUGGAACCUGGUCUGUCUGUCUGUCUAGCACCACGGCGCUGG
Get precursor sequence
Structure
        10          20        30        40        50        
CGCACAAGUCGGGGCACA--|      G         CA GU   U    U   ACAGC 
                    AGACAGA AGGCCAGGU  C  CCC GCAG UAC     \
                    UCUGUCU UCUGGUCCA  G  GGG CGUC GUG     U
GGUCGCGGCACCACGAUCUG^      G         AG UG   U    C   AGUAC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-370_5p*

mirBase accessionNone
Sequence
0- CAGGUCACGUCCCUGCAGUUAC -22
Get sequence
Mature sequence

Mmr-Mir-370_3p

mirBase accessionNone
Sequence
35- GCCUGCUGGGGUGGAACCUGGU -57
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