MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-370

Family name MIR-370 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-370
Paralogues
Orthologues Bta-Mir-370  Cja-Mir-370  Cpo-Mir-370  Eca-Mir-370  Hsa-Mir-370  Mml-Mir-370  Mmr-Mir-370  Mmu-Mir-370  Ocu-Mir-370  Pab-Mir-370  Rno-Mir-370 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(canFam3_add)
chr8: 69132798-69132854 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-370)
Mir-493 chr8: 69094351-69094412 [+] UCSC Ensembl
Mir-431 chr8: 69102958-69103021 [+] UCSC Ensembl
Mir-433 chr8: 69103838-69103911 [+] UCSC Ensembl
Mir-127 chr8: 69104942-69104997 [+] UCSC Ensembl
Mir-432 chr8: 69106428-69106496 [+] UCSC Ensembl
Mir-136-v1 chr8: 69106615-69106670 [+] UCSC Ensembl
Mir-136-v2 chr8: 69106615-69106670 [+] UCSC Ensembl
Mir-370 chr8: 69132798-69132854 [+] UCSC Ensembl
Seed CCUGCUG
Precursor
(pre-Mir +30nt flank)
CGCACAAGUCGGGGCACAAGACAGAGAGGCCAGGUCACGUCUCUGCAGUUACACAGCUCAUGAGUGCCUGCUGGGGUGGAACCUGGUCUGUCUGUCUGUCUAGCACCACAGCUCCGG
Get precursor sequence
Structure
        10          20        30        40        50        
CGCACAAGUCGGGGCACA--|      G         CA GU   U    U   ACAGC 
                    AGACAGA AGGCCAGGU  C  CUC GCAG UAC     \
                    UCUGUCU UCUGGUCCA  G  GGG CGUC GUG     U
GGCCUCGACACCACGAUCUG^      G         AG UG   U    C   AGUAC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-370_5p*

mirBase accessionNone
Sequence
0- CAGGUCACGUCUCUGCAGUUAC -22
Get sequence
Mature sequence

Cfa-Mir-370_3p

mirBase accessionMIMAT0009889
Sequence
35- GCCUGCUGGGGUGGAACCUGGU -57
Get sequence
Proposed targets TargetScanVert: cfa-miR-370
miRDB: MIMAT0009889