Mir-430-P35d

MirGeneDB ID

Mml-Mir-430-P35d

Family name

MIR-430 (all species)

Seed

UCGUGCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-517a

Paralogues

Mml-Mir-430-P1 Mml-Mir-430-P2 Mml-Mir-430-P3 Mml-Mir-430-P4 Mml-Mir-430-P5 Mml-Mir-430-P6 Mml-Mir-430-P7 Mml-Mir-430-P8 Mml-Mir-430-P9c Mml-Mir-430-P9d Mml-Mir-430-P9e Mml-Mir-430-P10 Mml-Mir-430-P11a Mml-Mir-430-P11b Mml-Mir-430-P12 Mml-Mir-430-P13a1 Mml-Mir-430-P13a2 Mml-Mir-430-P13b Mml-Mir-430-P13c Mml-Mir-430-P14 Mml-Mir-430-P18 Mml-Mir-430-P19 Mml-Mir-430-P21 Mml-Mir-430-P24a1 Mml-Mir-430-P24a2 Mml-Mir-430-P24b Mml-Mir-430-P26a Mml-Mir-430-P26b Mml-Mir-430-P27 Mml-Mir-430-P28 Mml-Mir-430-P29c Mml-Mir-430-P29d Mml-Mir-430-P31c Mml-Mir-430-P31d Mml-Mir-430-P33 Mml-Mir-430-P35e Mml-Mir-430-P35f-v1 Mml-Mir-430-P35f-v2 Mml-Mir-430-P37 Mml-Mir-430-P41 Mml-Mir-430-P42 Mml-Mir-430-P43 Mml-Mir-430-P44 Mml-Mir-430-P45 Mml-Mir-430-P47 Mml-Mir-430-P49

Orthologues

Pma-Mir-430-o35

Node of Origin (locus)

M. mulatta

Node of Origin (family)

Vertebrata

Genome context
(rheMac8_trace)

chr19: 49059976-49060036 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P35d)

Mir-430-P8 chr19: 49015081-49015138 [+] UCSC Ensembl
Mir-1323 chr19: 49019644-49019699 [+] UCSC Ensembl
Mir-498 chr19: 49021712-49021771 [+] UCSC Ensembl
Mir-430-P9c chr19: 49028325-49028387 [+] UCSC Ensembl
Mir-430-P28 chr19: 49030126-49030186 [+] UCSC Ensembl
Mir-430-P21 chr19: 49034618-49034677 [+] UCSC Ensembl
Mir-430-P47 chr19: 49038964-49039022 [+] UCSC Ensembl
Mir-430-P18 chr19: 49039776-49039836 [+] UCSC Ensembl
Mir-430-P44 chr19: 49042159-49042219 [+] UCSC Ensembl
Mir-430-P42 chr19: 49043006-49043064 [+] UCSC Ensembl
Mir-430-P14 chr19: 49044975-49045033 [+] UCSC Ensembl
Mir-430-P26b chr19: 49046148-49046208 [+] UCSC Ensembl
Mir-430-P10 chr19: 49048508-49048566 [+] UCSC Ensembl
Mir-430-P26a chr19: 49053892-49053952 [+] UCSC Ensembl
Mir-430-P11a chr19: 49056095-49056153 [+] UCSC Ensembl
Mir-430-P43 chr19: 49057961-49058020 [+] UCSC Ensembl
Mir-430-P35d chr19: 49059976-49060036 [+] UCSC Ensembl
Mir-430-P19 chr19: 49061125-49061189 [+] UCSC Ensembl
Mir-430-P24a2 chr19: 49066431-49066490 [+] UCSC Ensembl
Mir-430-P27 chr19: 49068476-49068541 [+] UCSC Ensembl
Mir-430-P13a2 chr19: 49073256-49073314 [+] UCSC Ensembl
Mir-430-P13b chr19: 49075909-49075967 [+] UCSC Ensembl
Mir-430-P13a1 chr19: 49077769-49077827 [+] UCSC Ensembl
Mir-430-P13c chr19: 49080363-49080424 [+] UCSC Ensembl
Mir-430-P33 chr19: 49089851-49089913 [+] UCSC Ensembl
Mir-430-P24a1 chr19: 49092996-49093055 [+] UCSC Ensembl
Mir-430-P35e chr19: 49094969-49095027 [+] UCSC Ensembl
Mir-430-P37 chr19: 49102341-49102401 [+] UCSC Ensembl
Mir-430-P29c chr19: 49104035-49104095 [+] UCSC Ensembl
Mir-430-P41 chr19: 49105608-49105667 [+] UCSC Ensembl
Mir-430-P24b chr19: 49108097-49108156 [+] UCSC Ensembl
Mir-430-P31d chr19: 49109643-49109704 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UCACAAUAAAAGAAGAACUCAUGCAGUGACCCUCUAGAUGGAAGCACUGUCUGUGGUCUAAAAGAAAAGAUCGUGCAUCCUUUUAGAGUGUUACCGUUUGAGAGGAGCAACGGUGGAGUCG

Get precursor sequence

Structure

        10          20        30        40        50          
UCACAAUAAAAGAAGAA--|   U  A     C       U   A    U    GUGGUCU 
                   CUCA GC GUGAC CUCUAGA GGA GCAC GUCU       \
                   GAGU UG CAUUG GAGAUUU CCU CGUG UAGA       A
GCUGAGGUGGCAACGAGGA^   U  C     U       U   A    C    AAAGAAA 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-430-P35d_5p*

mirBase accession

None

Sequence

0- CCUCUAGAUGGAAGCACUGUCU -22

Get sequence

Mature sequence

Mml-Mir-430-P35d_3p

mirBase accession

MIMAT0006375

Sequence

39- AUCGUGCAUCCUUUUAGAGUGU -61

Get sequence

Proposed targets

TargetScanVert: mml-miR-517a