MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-430-P31c

Family name MIR-430 (all species)
Seed UCUCGAG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-516a-1
Paralogues Mml-Mir-430-P1  Mml-Mir-430-P2  Mml-Mir-430-P3  Mml-Mir-430-P4  Mml-Mir-430-P5  Mml-Mir-430-P6  Mml-Mir-430-P7  Mml-Mir-430-P8  Mml-Mir-430-P9c  Mml-Mir-430-P9d  Mml-Mir-430-P9e  Mml-Mir-430-P10  Mml-Mir-430-P11a  Mml-Mir-430-P11b  Mml-Mir-430-P12  Mml-Mir-430-P13a1  Mml-Mir-430-P13a2  Mml-Mir-430-P13b  Mml-Mir-430-P13c  Mml-Mir-430-P14  Mml-Mir-430-P18  Mml-Mir-430-P19  Mml-Mir-430-P21  Mml-Mir-430-P24a1  Mml-Mir-430-P24a2  Mml-Mir-430-P24b  Mml-Mir-430-P26a  Mml-Mir-430-P26b  Mml-Mir-430-P27  Mml-Mir-430-P28  Mml-Mir-430-P29c  Mml-Mir-430-P29d  Mml-Mir-430-P31d  Mml-Mir-430-P33  Mml-Mir-430-P35d  Mml-Mir-430-P35e  Mml-Mir-430-P35f-v1  Mml-Mir-430-P35f-v2  Mml-Mir-430-P37  Mml-Mir-430-P41  Mml-Mir-430-P42  Mml-Mir-430-P43  Mml-Mir-430-P44  Mml-Mir-430-P45  Mml-Mir-430-P47  Mml-Mir-430-P49 
Orthologues Loc-Mir-430-o31 
Node of Origin (locus) M. mulatta
Node of Origin (family) Vertebrata
Genome context
(rheMac8_trace)
chr19: 49114300-49114361 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P31c)
Mir-430-P24a2 chr19: 49066431-49066490 [+] UCSC Ensembl
Mir-430-P27 chr19: 49068476-49068541 [+] UCSC Ensembl
Mir-430-P13a2 chr19: 49073256-49073314 [+] UCSC Ensembl
Mir-430-P13b chr19: 49075909-49075967 [+] UCSC Ensembl
Mir-430-P13a1 chr19: 49077769-49077827 [+] UCSC Ensembl
Mir-430-P13c chr19: 49080363-49080424 [+] UCSC Ensembl
Mir-430-P33 chr19: 49089851-49089913 [+] UCSC Ensembl
Mir-430-P24a1 chr19: 49092996-49093055 [+] UCSC Ensembl
Mir-430-P35e chr19: 49094969-49095027 [+] UCSC Ensembl
Mir-430-P37 chr19: 49102341-49102401 [+] UCSC Ensembl
Mir-430-P29c chr19: 49104035-49104095 [+] UCSC Ensembl
Mir-430-P41 chr19: 49105608-49105667 [+] UCSC Ensembl
Mir-430-P24b chr19: 49108097-49108156 [+] UCSC Ensembl
Mir-430-P31d chr19: 49109643-49109704 [+] UCSC Ensembl
Mir-430-P31c chr19: 49114300-49114361 [+] UCSC Ensembl
Mir-430-P5 chr19: 49142073-49142134 [+] UCSC Ensembl
Mir-430-P6 chr19: 49142282-49142340 [+] UCSC Ensembl
Mir-430-P7 chr19: 49142989-49143049 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGAGCAAGAAGAUCUCAGGCUGUGACCGUCUCGAGGAAAGAAGCACUUUCUGUUGUCUAAAGAAAAGGAAGUGUUUCCUUCCCGAGGGUUACGGUUUGAGAAAAGCAACGUUGAAGUUG
Get precursor sequence
Structure
        10           20        30        40        50        60 
GCUGGAGCAAGAAGAUC---|            GU    A    A            GUUGUC 
                    UCAGGCUGUGACC  CUCG GGAA GAAGCACUUUCU      U
                    AGUUUGGCAUUGG  GAGC CCUU CUUUGUGAAGGA      A
GUUGAAGUUGCAACGAAAAG^            --    -    C            AAAGAA 
120       110       100        90           80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-430-P31c_5p

mirBase accessionMIMAT0006373
Sequence
0- GUCUCGAGGAAAGAAGCACUUUCU -24
Get sequence
Proposed targets TargetScanVert: mml-miR-516a-5p
Star sequence

Mml-Mir-430-P31c_3p* (predicted)

mirBase accessionMIMAT0006374
Sequence
40- GAAGUGUUUCCUUCCCGAGGGU -62
Get sequence
Proposed targets TargetScanVert: mml-miR-516a-3p