MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-105-P1

Family name MIR-105 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-105-2
Paralogues Mml-Mir-105-P2 
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cja-Mir-105-P1  Cpo-Mir-105-P1  Eca-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mmr-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Pab-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014356.1: 148390067-148390125 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P1)
Mir-105-P2 CM014356.1: 148387875-148387933 [-] UCSC Ensembl
Mir-105-P1 CM014356.1: 148390067-148390125 [-] UCSC Ensembl
Seed CAAAUGC
Precursor
(pre-Mir +30nt flank)
GUUGCAGGAUCUUCUGUGUGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUUAUGCACCACGGAUGUUUGAGCAUGUGCUAUGGUGUCUACUUUUGCAACAUUGCCAUCU
Get precursor sequence
Structure
        10          20        30        40        50         
GUUGCAGGAUCUUCUGU--|  U         U  A          UC        GCUG 
                   GUG GCAUCGUGG CA AUGCUCAGAC  CUGUGGUG    C
                   CAU UGUGGUAUC GU UACGAGUUUG  GGCACCAC    U
UCUACCGUUACAACGUUUU^  C         -  G          UA        GUAU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-105-P1_5p

mirBase accessionMIMAT0002454
Sequence
0- UCAAAUGCUCAGACUCCUGUGGUG -24
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Proposed targets TargetScanVert: mml-miR-105-5p
Star sequence

Mml-Mir-105-P1_3p*

mirBase accessionMIMAT0026583
Sequence
36- CCACGGAUGUUUGAGCAUGUGCU -59
Get sequence
Proposed targets TargetScanVert: mml-miR-105-3p