MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-105-P1

Family name MIR-105 (all species)
Seed CAAAUGC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-105-2
Paralogues Mml-Mir-105-P2 
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cpo-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 146011649-146011707 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P1)
Mir-105-P2 chrX: 146009457-146009515 [-] UCSC Ensembl
Mir-105-P1 chrX: 146011649-146011707 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUGCAGGAUCUUCUGUGUGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUUAUGCACCACGGAUGUUUGAGCAUGUGCUAUGGUGUCUACUUUUGCAACAUUGCCAUCU
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Structure
        10          20        30        40        50         
GUUGCAGGAUCUUCUGU--|  U         U  A          UC        GCUG 
                   GUG GCAUCGUGG CA AUGCUCAGAC  CUGUGGUG    C
                   CAU UGUGGUAUC GU UACGAGUUUG  GGCACCAC    U
UCUACCGUUACAACGUUUU^  C         -  G          UA        GUAU 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-105-P1_5p

mirBase accessionMIMAT0002454
Sequence
0- UCAAAUGCUCAGACUCCUGUGGUG -24
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Proposed targets TargetScanVert: mml-miR-105-5p
Star sequence

Mml-Mir-105-P1_3p*

mirBase accessionMIMAT0026583
Sequence
36- CCACGGAUGUUUGAGCAUGUGCU -59
Get sequence
Proposed targets TargetScanVert: mml-miR-105-3p