MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-105-P1

Family name MIR-105 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-105b
Paralogues Cfa-Mir-105-P2 
Orthologues Bta-Mir-105-P1  Cja-Mir-105-P1  Cpo-Mir-105-P1  Eca-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mml-Mir-105-P1  Mmr-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Pab-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 120405359-120405416 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P1)		 Mir-105-P2 chrX: 120403205-120403263 [-] UCSC Ensembl
Mir-105-P1 chrX: 120405359-120405416 [-] UCSC Ensembl
Seed CAAAUGC
Precursor
(pre-Mir +30nt flank)		 
GUUGCAGGUUCUUCUGUGUGUGCAUCAUGGUCAAAUGCUCAGACUCCUUGGUGGCUGCUUAUGCACCAUGAAUGUUUGAGCAUGUGCUAUGGUGUCUACUUGUGCAACAUCACCAUCU
Get precursor sequence
Structure
        10          20        30        40         50        
GUUGCAGGUUCUUCUGU--|  U         U  A          UCCU-     GCUG 
                   GUG GCAUCAUGG CA AUGCUCAGAC     UGGUG    C
                   CAU UGUGGUAUC GU UACGAGUUUG     ACCAC    U
UCUACCACUACAACGUGUU^  C         -  G          UAAGU     GUAU 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-105-P1_5p
mirBase accessionMIMAT0010198
Sequence 
0- UCAAAUGCUCAGACUCCUUGGUG -23
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Proposed targets TargetScanVert: cfa-miR-105b
miRDB: MIMAT0010198
Star sequence

Cfa-Mir-105-P1_3p*
mirBase accessionNone
Sequence 
35- CCAUGAAUGUUUGAGCAUGUGCU -58
Get sequence