MirGeneDB ID | Hme-Mir-282 |
Family name |
MIR-282 (all species) |
Species |
Longwing butterfly (Heliconius melpomene) |
MiRBase ID |
hme-mir-282
|
Paralogues |
|
Orthologues |
Aae-Mir-282-P1
Aae-Mir-282-P2
Aga-Mir-282
Bge-Mir-282
Dan-Mir-282
Dma-Mir-282-v1
Dme-Mir-282
Dmo-Mir-282
Dpu-Mir-282
Dsi-Mir-282
Dya-Mir-282
Gpa-Mir-282
Tca-Mir-282
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Pancrustacea
|
Genome context (Hmel_1) |
HE670913: 81384-81446 [+]
Ensembl
|
Seed |
AGCCUCU |
Precursor (pre-Mir +30nt flank) |
AAGAAGAUAUGAAGAGCUGGGAUGUUGACCUAGCCUCUCCUUGGCUUUGUCUGUAUCUUACGAUGUUUCAGACAUAGCCUGAUAGAGGUUACGUUUUGUCCCGUUUACUUCUACAAUAGAAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAGAAGAUAUGAAGAGCU---| UU C CCUU U GUAUCUUA
GGGAUG GAC UAGCCUCU GGCU UGUCU \
CCCUGU UUG AUUGGAGA CCGA ACAGA C
AGAAGAUAACAUCUUCAUUUG^ U- C UAGU U CUUUGUAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Hme-Mir-282_5p |
mirBase accession | MIMAT0024968 |
Sequence |
0- UAGCCUCUCCUUGGCUUUGUCU -22
Get sequence
|
Star sequence |
Hme-Mir-282_3p* |
mirBase accession | None |
Sequence |
41- ACAUAGCCUGAUAGAGGUUACG -63
Get sequence
|