MirGeneDB ID | Aae-Mir-282-P1 |
Family name |
MIR-282 (all species) |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-282-1
|
Paralogues |
Aae-Mir-282-P2
|
Orthologues |
Aga-Mir-282
Bge-Mir-282
Dan-Mir-282
Dme-Mir-282
Dmo-Mir-282
Dpu-Mir-282
Dsi-Mir-282
Dya-Mir-282
Gpa-Mir-282
Hme-Mir-282
Tca-Mir-282
|
Node of Origin (locus) |
A. aegypti
|
Node of Origin (family) |
Pancrustacea
|
Genome context (Aaeg_L3) |
supercont1.369: 992996-993069 [+]
Ensembl
|
Seed |
AGCCUCU |
Precursor (pre-Mir +30nt flank) |
CGUCAUCGUCAUCGUCGCACAGGUGUAAUCUAGCCUCUCCUAGGCUUUGUCUGUUACCUUCCUUGGGAAUUCCACUAGCCAGACAUAGCCUGACAGAGGUUAGGUGAAAUCUGAAAAGUCAACGGCCAACGGUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGUCAUCGUCAUCGUCGCA--| GUA CC U GUUACCUUCCUUG
CAGGU AUCUAGCCUCU UAGGCU UGUCU G
GUCUA UGGAUUGGAGA GUCCGA ACAGA G
UUGGCAACCGGCAACUGAAAA^ AAG CA U CCGAUCACCUUAA
130 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Aae-Mir-282-P1_5p |
mirBase accession | MIMAT0014311 |
Sequence |
0- UAGCCUCUCCUAGGCUUUGUCU -22
Get sequence
|
Star sequence |
Aae-Mir-282-P1_3p* |
mirBase accession | MIMAT0014312 |
Sequence |
52- ACAUAGCCUGACAGAGGUUAGG -74
Get sequence
|