MirGeneDB ID | Dmo-Mir-282 |
Family name |
MIR-282 (all species) |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
dmo-mir-282
|
Paralogues |
|
Orthologues |
Aae-Mir-282-P1
Aae-Mir-282-P2
Aga-Mir-282
Bge-Mir-282
Dan-Mir-282
Dma-Mir-282-v1
Dme-Mir-282
Dpu-Mir-282
Dsi-Mir-282
Dya-Mir-282
Gpa-Mir-282
Hme-Mir-282
Tca-Mir-282
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Pancrustacea
|
Genome context (Dmoj_caf1) |
scaffold_6680: 1963310-1963374 [-]
Ensembl
|
Seed |
AGCCUCU |
Precursor (pre-Mir +30nt flank) |
UUUUUUUUGCGGUGCAUUUCCUUAUAAAUCUAGCCUCUACUAGGCUUUGUCUGUGCAUUUGAUAUAAGAUCAGACAUAGCCUAUGAGAGGUUAGGUGUAGCAAGGGGUCAAACAGCAGAGAGCAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUUUUUUUGCGGUGCAU- A-| A AC U GUGCAUUUG
UUCCUU UA AUCUAGCCUCU UAGGCU UGUCU \
GGGGAA AU UGGAUUGGAGA AUCCGA ACAGA A
CACGAGAGACGACAAACU CG^ G GU U CUAGAAUAU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Dmo-Mir-282_5p |
mirBase accession | MIMAT0008645 |
Sequence |
0- UAGCCUCUACUAGGCUUUGUCU -22
Get sequence
|
Co-mature sequence |
Dmo-Mir-282_3p |
mirBase accession | None |
Sequence |
43- ACAUAGCCUAUGAGAGGUUAGG -65
Get sequence
|