MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-345

Family name MIR-345 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-345  Cfa-Mir-345  Cja-Mir-345  Cpo-Mir-345  Dno-Mir-345  Eca-Mir-345  Hsa-Mir-345  Laf-Mir-345-P1  Laf-Mir-345-P2  Laf-Mir-345-P3  Mml-Mir-345  Mmr-Mir-345  Mmu-Mir-345-v1  Pab-Mir-345  Rno-Mir-345 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 83101738-83101795 [-] UCSC
Seed CUGACUC
Precursor
(pre-Mir +30nt flank)		 
GUGAUGACCACGGGAACCAGGCCCAGGCCUGCUGACUCCUAGUCCAGUGCUCGUGAUGGGCAUAGGGCCCUGAACUAGGGGUCUGGAGGUCUGCGCUUGAAUAUCGACAAGUUCUUUU
Get precursor sequence
Structure
        10          20        30         40        50        
GUGAUGACCACGGGAAC--|    C       G  -          C   U    GUGAU 
                   CAGGC CAGGCCU CU GACUCCUAGU CAG GCUC     G
                   GUUCG GUCUGGA GG CUGGGGAUCA GUC CGGG     G
UUUUCUUGAACAGCUAUAA^    C       -  U          A   C    AUACG 
      110       100        90         80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Mature sequence

Ete-Mir-345_5p
mirBase accessionNone
Sequence 
0- GCUGACUCCUAGUCCAGUGCUC -22
Get sequence
Star sequence

Ete-Mir-345_3p*
mirBase accessionNone
Sequence 
36- GCCCUGAACUAGGGGUCUGGAG -58
Get sequence