| MirGeneDB ID | Dno-Mir-345 |
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| Family name |
MIR-345 (all species) |
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| Seed |
CUGACUC |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
dno-mir-345
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-345
Cfa-Mir-345
Cpo-Mir-345
Ete-Mir-345
Hsa-Mir-345
Mml-Mir-345
Mmu-Mir-345
Rno-Mir-345
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH562024: 202692-202749 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUCAGGAAGCAGAGACCCAGCCCCAGGUCUGCUGACUCCUAGUCCAGAGCCCGUGGUGGCCGUGGGGCCCUGAACUUGGGGUCUGGAGGCCGGGGUUUGGAUAGCACCUGCCUCUCUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCAGGAAGCAGAGACCC---| A G - U C A GUGGU
AGCCCC GGUCU CU GACUCC AGU CAG GCCC G
UUGGGG CCGGA GG CUGGGG UCA GUC CGGG G
GUCUCUCCGUCCACGAUAGGU^ - - U U A C GUGCC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Dno-Mir-345_5p |
| mirBase accession | MIMAT0047827 |
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| Sequence |
0- GCUGACUCCUAGUCCAGAGCCC -22
Get sequence
|
|---|
| Star sequence |
Dno-Mir-345_3p* |
| mirBase accession | MIMAT0047828 |
|---|
| Sequence |
37- CCCUGAACUUGGGGUCUGGAG -58
Get sequence
|
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