MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-1301

Family name MIR-1301 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1301  Cfa-Mir-1301  Cja-Mir-1301  Cpo-Mir-1301  Dno-Mir-1301  Eca-Mir-1301  Hsa-Mir-1301  Mml-Mir-1301  Mmr-Mir-1301  Pab-Mir-1301 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980293: 22580093-22580152 [-] UCSC
Seed UGCAGCU
Precursor
(pre-Mir +30nt flank)		 
CAGGCGACCCCUGGAAUGGGGAUUGUGGGGGGUCACUCUAGGCACCGCAGCACUGUGCUGGGGAUGUUGCAGCUGCCUGGGAGUGAUUCCACACAGUCCUCUCUGCCUCCAGGGUCACCC
Get precursor sequence
Structure
        10          20        30         40         50        
CAGGCGACCCCUGGAAU--          G         -       CC-|     CUGUG 
                   GGGGAUUGUG GGGGUCACU CUAGGCA   GCAGCA     C
                   CUCCUGACAC CCUUAGUGA GGUCCGU   CGUUGU     U
CCCACUGGGACCUCCGUCU          A         G       CGA^     AGGGG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-1301_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUCACUCUAGGCACCGCAGCA -22
Get sequence
Mature sequence

Ete-Mir-1301_3p
mirBase accessionNone
Sequence 
36- UUGCAGCUGCCUGGGAGUGAUUCC -60
Get sequence