MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1301

Family name MIR-1301 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-1301
Paralogues
Orthologues Bta-Mir-1301  Cfa-Mir-1301  Cja-Mir-1301  Cpo-Mir-1301  Dno-Mir-1301  Ete-Mir-1301  Hsa-Mir-1301  Mml-Mir-1301  Mmr-Mir-1301  Pab-Mir-1301 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009162.1: 71646917-71646976 [+] UCSC Ensembl
Seed UGCAGCU
Precursor
(pre-Mir +30nt flank)		 
CAAGUGACCCCUAGAAUGGGGGCUGUGGGGGGUCACUCUAGGCACCGCAGCACUGUGCUGGGGAUGUUGCAGCUGCCUGGGAGUGAUUUCACACAGUCCUCUCUGCCUCAAGGGUCACCC
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Structure
        10          20        30         40         50        
CAAGUGACCCCUAGAAU--          G GG      -       CC-|     CUGUG 
                   GGGGGCUGUG G  GUCACU CUAGGCA   GCAGCA     C
                   CUCCUGACAC C  UAGUGA GGUCCGU   CGUUGU     U
CCCACUGGGAACUCCGUCU          A UU      G       CGA^     AGGGG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-1301_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUCACUCUAGGCACCGCAGCA -22
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Mature sequence

Eca-Mir-1301_3p
mirBase accessionMIMAT0013070
Sequence 
36- UUGCAGCUGCCUGGGAGUGAUUUC -60
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