MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-1301

Family name MIR-1301 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-1301
Paralogues
Orthologues Cfa-Mir-1301  Cja-Mir-1301  Cpo-Mir-1301  Dno-Mir-1301  Eca-Mir-1301  Ete-Mir-1301  Hsa-Mir-1301  Mml-Mir-1301  Mmr-Mir-1301  Pab-Mir-1301 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037338.1: 73985200-73985257 [+] UCSC Ensembl
Seed UGCAGCU
Precursor
(pre-Mir +30nt flank)		 
CAAGCGACCCCUAGAGUGGGGGUUGUGGGGGGUCACUCUAGGCCCCGCAGCACUGUGCUGGAUGUUGCAGCUGCCUAGGAGUGAUUUCACACAGUCCUCUCGGCCUCAAGGGUCGCCC
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Structure
        10          20        30         40         50       
CAAGCGACCCCUAGAGU--    GU    G GG      -      CCC-|     CUGU 
                   GGGG  UGUG G  GUCACU CUAGGC    GCAGCA    G
                   CUCC  ACAC C  UAGUGA GAUCCG    CGUUGU    C
CCCGCUGGGAACUCCGGCU    UG    A UU      G      UCGA^     AGGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-1301_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUCACUCUAGGCCCCGCAGCA -22
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Mature sequence

Bta-Mir-1301_3p
mirBase accessionMIMAT0009958
Sequence 
34- UUGCAGCUGCCUAGGAGUGAUUUC -58
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Proposed targets TargetScanVert: bta-miR-1301