| MirGeneDB ID | Dno-Mir-1301 |
|---|
| Family name |
MIR-1301 (all species) |
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| Seed |
UGCAGCU |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
dno-mir-1301
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-1301
Cfa-Mir-1301
Cpo-Mir-1301
Ete-Mir-1301
Hsa-Mir-1301
Mml-Mir-1301
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH564648: 198054-198113 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CCAGGGAGCCCUAGAUUGGGGGUUGUGGGGGGUCACUCUGGGCACCGCAGCACUGUGCUGGGGAUGUUGCAGCUGCCUGGGAGUGAUUUCACACAGUCCCCUCUGCCUCGAGGGGCACCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAGGGAGCCCUAGAUU-- GU G GG - UG CC-| CUGUG
GGGG UGUG G GUCACU C GGCA GCAGCA C
CCCC ACAC C UAGUGA G CCGU CGUUGU U
CCCACGGGGAGCUCCGUCU UG A UU G GU CGA^ AGGGG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dno-Mir-1301_5p* |
| mirBase accession | MIMAT0048043 |
|---|
| Sequence |
0- GGUCACUCUGGGCACCGCAGCA -22
Get sequence
|
|---|
| Mature sequence |
Dno-Mir-1301_3p |
| mirBase accession | MIMAT0048044 |
|---|
| Sequence |
36- UUGCAGCUGCCUGGGAGUGAUUUC -60
Get sequence
|
|---|
