MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-133-P5a-v2

Family name MIR-133 (all species)
Seed UGGUCCC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-133-P5a-v1  Ebu-Mir-133-P5b-v1  Ebu-Mir-133-P5b-v2  Ebu-Mir-133-P6a-v1  Ebu-Mir-133-P6a-v2  Ebu-Mir-133-P6b-v1  Ebu-Mir-133-P6b-v2  Ebu-Mir-133-P7-v1  Ebu-Mir-133-P7-v2  Ebu-Mir-133-P8-v1  Ebu-Mir-133-P8-v2 
Orthologues Aae-Mir-133  Asu-Mir-133  Bge-Mir-133  Cbr-Mir-133  Cel-Mir-133  Cgi-Mir-133  Cin-Mir-133  Cte-Mir-133  Dan-Mir-133  Dma-Mir-133  Dme-Mir-133  Dmo-Mir-133  Dpu-Mir-133  Dsi-Mir-133  Dya-Mir-133  Efe-Mir-133  Esc-Mir-133  Hme-Mir-133  Isc-Mir-133  Lan-Mir-133  Lgi-Mir-133  Obi-Mir-133  Ovu-Mir-133  Spu-Mir-133  Tca-Mir-133  Xbo-Mir-133 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02005852.1: 186353-186412 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAUGCUCAUGUCAAGGAUGCUUUGCAGUUGCUGGUCAAACGGAACCAAAUCGUGGUCUACGAUGGUUUGGUCCCCUUCAACCAGCUGCAGCCUAGCACAGUGACUCACGAUCGCCUUU
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Structure
        10          20        30        40        50         
GCAAUGCUCAUGUCAAGGA--|   UU  A  U      CA  C  A       CGUGGU 
                     UGCU  GC GU GCUGGU  AA GG ACCAAAU      C
                     ACGA  CG CG CGACCA  UU CC UGGUUUG      U
UUUCCGCUAGCACUCAGUGAC^   UC  A  U      AC  C  C       GUAGCA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Ebu-Mir-133-P5a-v2_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGCUGGUCAAACGGAACCAAAU -22
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Mature sequence

Ebu-Mir-133-P5a-v2_3p
mirBase accessionNone
Sequence 
38- UUGGUCCCCUUCAACCAGCUGC -60
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