MirGeneDB 2.1

MirGeneDB ID

Dre-Mir-737

Family name MIR-737 (all species)
Seed UUUUUUU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-737
Paralogues
Orthologues Aca-Mir-737  Ami-Mir-737  Cli-Mir-737  Cpi-Mir-737  Gja-Mir-737  Gmo-Mir-737  Lch-Mir-737  Loc-Mir-737  Mal-Mir-737  Mun-Mir-737  Oan-Mir-737  Pbv-Mir-737  Spt-Mir-737  Tni-Mir-737 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(danRer11)
chr18: 45962916-45962976 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUAAGCUCUCCCACAGCUGCUGUGCUGUUGUUUUUUUAGGUUUUGAUUUUUGUGAAAUGUCGAUGAGAAAAUCAAAACCUAAAGAAAAUACUGCGCAGAUAGAUGGACAUCACCUCUGCC
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Structure
        10         20         30        40        50          
CUUAAGCUCUCCCACAG-   -|     U  UG                     GUGAAAU 
                  CUG CUGUGC GU  UUUUUUUAGGUUUUGAUUUUU       \
                  GAU GACGCG CA  AAAGAAAUCCAAAACUAAAAG       G
CCGUCUCCACUACAGGUA   A^     U  UA                     AGUAGCU 
 .       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-737_5p

mirBase accessionMIMAT0032013
Sequence
0- GUUUUUUUAGGUUUUGAUUUUU -22
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Star sequence

Dre-Mir-737_3p*

mirBase accessionMIMAT0003768
Sequence
39- AAAUCAAAACCUAAAGAAAAUA -61
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Proposed targets TargetScanFish: dre-miR-737