MirGeneDB 2.1

MirGeneDB ID

Loc-Mir-737

Family name MIR-737 (all species)
Seed UUUUUUU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-737  Ami-Mir-737  Cli-Mir-737  Cpi-Mir-737  Dre-Mir-737  Gja-Mir-737  Gmo-Mir-737  Lch-Mir-737  Mal-Mir-737  Mun-Mir-737  Oan-Mir-737  Pbv-Mir-737  Spt-Mir-737  Tni-Mir-737 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(LepOcu1)
LG14: 16214628-16214688 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAUGCAUCAAGUGUUUCUGCUUUGCUGUAGUUUUUUUAGGUUUUGAUUUUUAUUGAAUUCAGAUGAGAAAACCAAAACCUAAAGAAAAUAUUGCACAGCCAGACUGUCCAUCAGUGGCCA
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Structure
        10          20        30        40        50          
UGAUGCAUCAAGUGUUU-  -|  U   U   G               A     AUUGAAU 
                  CU GCU UGC GUA UUUUUUUAGGUUUUG UUUUU       \
                  GA CGA ACG UAU AAAGAAAUCCAAAAC AAAAG       U
ACCGGUGACUACCUGUCA  C^  C   U   A               C     AGUAGAC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-737_5p

mirBase accessionNone
Sequence
0- GUUUUUUUAGGUUUUGAUUUUU -22
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Star sequence

Loc-Mir-737_3p*

mirBase accessionNone
Sequence
39- AAACCAAAACCUAAAGAAAAUA -61
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