MirGeneDB 3.0

MirGeneDB ID

Aca-Mir-737

Family name MIR-737 (all species)
Species Green anole lizard (Anolis carolinensis)
MiRBase ID
Paralogues
Orthologues Ami-Mir-737  Cli-Mir-737  Cpi-Mir-737  Dre-Mir-737  Gja-Mir-737  Gmo-Mir-737  Lch-Mir-737  Loc-Mir-737  Mal-Mir-737  Mun-Mir-737  Oan-Mir-737  Pbv-Mir-737  Spt-Mir-737  Tni-Mir-737 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(anoCar2)
GL343245.1: 1554419-1554479 [-] UCSC Ensembl
Seed UUUUUUU
Precursor
(pre-Mir +30nt flank)
CUGCCCUGCGACACUUGCUACUCUGCUGUUGUUUUUUUAGGUUUUGAUUUUUAUGCCAUCCUCAUGCGAAAAUCAAAACCUAAAGAAAAUGCUGCAAAGAUAGAUUAUUCUGCUGCUGUUG
Get precursor sequence
Structure
        10         20         30        40        50          
CUGCCCUGCGACACUUG-   -| C   U  UG                     AUGCCAU 
                  CUA CU UGC GU  UUUUUUUAGGUUUUGAUUUUU       \
                  GAU GA ACG CG  AAAGAAAUCCAAAACUAAAAG       C
GUUGUCGUCGUCUUAUUA   A^ A   U  UA                     CGUACUC 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-737_5p

mirBase accessionNone
Sequence
0- GUUUUUUUAGGUUUUGAUUUUU -22
Get sequence
Star sequence

Aca-Mir-737_3p*

mirBase accessionNone
Sequence
39- AAAUCAAAACCUAAAGAAAAUG -61
Get sequence