MirGeneDB 3.0

MirGeneDB ID

Mal-Mir-737

Family name MIR-737 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-737  Ami-Mir-737  Cli-Mir-737  Cpi-Mir-737  Dre-Mir-737  Gja-Mir-737  Gmo-Mir-737  Lch-Mir-737  Loc-Mir-737  Mun-Mir-737  Oan-Mir-737  Pbv-Mir-737  Spt-Mir-737  Tni-Mir-737 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884956.1: 145429-145489 [+] UCSC Ensembl
Seed UUUUUUU
Precursor
(pre-Mir +30nt flank)
CCACCGCCGCCGCAGCUCUGCUGCUCUGUUGUUUUUUUAGGUUUUGAUUUUUUGUAGCAUUGGAUGAGAAAAUCAAAGCCUAAAGAAAAUACAGCGCUGACAGGAGACAAGCCCUUGAGUU
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Structure
        10         20         30        40        50          
CCACCGCCGCCGCAGCU-   CU-| U    UG                     UGUAGCA 
                  CUG   GC CUGU  UUUUUUUAGGUUUUGAUUUUU       \
                  GAC   CG GACA  AAAGAAAUCCGAAACUAAAAG       U
UUGAGUUCCCGAACAGAG   AGU^ C    UA                     AGUAGGU 
 .       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-737_5p

mirBase accessionNone
Sequence
0- GUUUUUUUAGGUUUUGAUUUUU -22
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Star sequence

Mal-Mir-737_3p* (predicted)

mirBase accessionNone
Sequence
39- AAAUCAAAGCCUAAAGAAAAUA -61
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