MirGeneDB ID | Dre-Mir-724-P1-v2 |
Family name |
MIR-724 (all species) |
Seed |
AAAGGGA |
Species |
Zebrafish (Danio rerio) |
MiRBase ID |
|
Paralogues |
Dre-Mir-724-P1-v1
Dre-Mir-724-P2-v1
Dre-Mir-724-P2-v2
|
Orthologues |
Gmo-Mir-724-P1-v1
Gmo-Mir-724-P1-v2
Mal-Mir-724-P1-v1
Mal-Mir-724-P1-v2
Tni-Mir-724-P1-v1
Tni-Mir-724-P1-v2
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Neopterygii
|
Genome context (danRer11) |
chr8: 24064224-24064283 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGCUGAUACUGUUACCCAGCAGACUGGAUUUAAAGGGAAUUUGCGACUGUUUAGUCACAUUAUUAGAACAGCCACACCUUCCUUUUAAGAUCUUGCCUGCUGCUCUGUCUCUUCUGCAGC
Get precursor sequence
|
Structure | 10 20 30 40 50
CGCUGAUACUGUUACCC-- ACU -| UU CGA AGUCAC
AGCAG GGAUU UAAAGGGAA UG CUGUUU \
UCGUC UCUAG AUUUUCCUU AC GACAAG A
CGACGUCUUCUCUGUCUCG CGU A^ CC ACC AUUAUU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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Mature sequence |
Dre-Mir-724-P1-v2_5p |
mirBase accession | None |
Sequence |
0- UAAAGGGAAUUUGCGACUGUUU -22
Get sequence
|
Star sequence |
Dre-Mir-724-P1-v2_3p* |
mirBase accession | None |
Sequence |
37- ACAGCCACACCUUCCUUUUAAGA -60
Get sequence
|