MirGeneDB 2.1

MirGeneDB ID

Dre-Mir-724-P1-v1

Family name MIR-724 (all species)
Seed UAAAGGG
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-724-P1-v2  Dre-Mir-724-P2-v1  Dre-Mir-724-P2-v2 
Orthologues Gmo-Mir-724-P1-v1  Gmo-Mir-724-P1-v2  Mal-Mir-724-P1-v1  Mal-Mir-724-P1-v2  Tni-Mir-724-P1-v1  Tni-Mir-724-P1-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Neopterygii
Genome context
(danRer11)
chr8: 24064223-24064284 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGCUGAUACUGUUACCCAGCAGACUGGAUUUAAAGGGAAUUUGCGACUGUUUAGUCACAUUAUUAGAACAGCCACACCUUCCUUUUAAGAUCUUGCCUGCUGCUCUGUCUCUUCUGCAGCC
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Structure
        10          20        30         40        50          
GCGCUGAUACUGUUACC--      ACU     -|        UU  CGA     UAGUCAC 
                   CAGCAG   GGAUU UAAAGGGAA  UG   CUGUU       \
                   GUCGUC   UCUAG AUUUUCCUU  AC   GACAA       A
CCGACGUCUUCUCUGUCUC      CGU     A^        CC  ACC     GAUUAUU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-724-P1-v1_5p

mirBase accessionNone
Sequence
0- UUAAAGGGAAUUUGCGACUGUU -22
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Star sequence

Dre-Mir-724-P1-v1_3p*

mirBase accessionNone
Sequence
39- CAGCCACACCUUCCUUUUAAGAU -62
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