MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-362-P5

Family name MIR-362 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-501
Paralogues Cpo-Mir-362-P3b  Cpo-Mir-362-P4  Cpo-Mir-362-P6 
Orthologues Cja-Mir-362-P5  Eca-Mir-362-P5  Hsa-Mir-362-P5  Mml-Mir-362-P5  Mmr-Mir-362-P5  Mmu-Mir-362-P5  Ocu-Mir-362-P5  Pab-Mir-362-P5  Rno-Mir-362-P5 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_132: 3009773-3009832 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-362-P5)		 Mir-188-P1 scaffold_132: 3003104-3003162 [+] UCSC
Mir-188-P2 scaffold_132: 3003465-3003524 [+] UCSC
Mir-362-P4 scaffold_132: 3009085-3009144 [+] UCSC
Mir-362-P5 scaffold_132: 3009773-3009832 [+] UCSC
Mir-362-P3b scaffold_132: 3010278-3010339 [+] UCSC
Mir-188-P3 scaffold_132: 3012570-3012628 [+] UCSC
Mir-362-P6 scaffold_132: 3014248-3014306 [+] UCSC
Seed AUCCUUU
Precursor
(pre-Mir +30nt flank)		 
UCCAGGCCUUUUGCUUUGCUCCUCCUCUCUAAUCCUUUGUCCCUGAGUGAGAAUGCUUUCAGAAUGCAGUGCUCCCAGGCAAGGGUUCUGAGAGGGCGAGCCUCCUCUGCAUGGAGAAGG
Get precursor sequence
Structure
        10          20        30        40        50         
UCCAGGCCUUUUGCUUU--|   C       UAAU        CCU    GAGAAUGCUU 
                   GCUC UCCUCUC    CCUUUGUC   GAGU          U
                   CGAG GGGAGAG    GGGAACGG   CUCG          C
GGAAGAGGUACGUCUCCUC^   C       UCUU        ACC    UGACGUAAGA 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-362-P5_5p
mirBase accessionMIMAT0047303
Sequence 
0- AAUCCUUUGUCCCUGAGUGAGAAU -24
Get sequence
Star sequence

Cpo-Mir-362-P5_3p* (predicted)
mirBase accessionMIMAT0047304
Sequence 
37- AGUGCUCCCAGGCAAGGGUUCUG -60
Get sequence