Mir-12073

MirGeneDB ID

Cpo-Mir-12073

Family name

MIR-12073 (all species)

Species

Guinea pig (Cavia porcellus)

MiRBase ID

cpo-mir-12073

Paralogues

Orthologues

Node of Origin (locus)

C. porcellus

Node of Origin (family)

C. porcellus

Genome context
(cavPor3)

scaffold_111: 952329-952402 [+] UCSC

Clustered miRNAs
(< 50kb from Mir-12073)

Mir-493 scaffold_111: 942145-942206 [+] UCSC
Mir-337-v1 scaffold_111: 946840-946900 [+] UCSC
Mir-337-v2 scaffold_111: 946840-946900 [+] UCSC
Mir-431 scaffold_111: 951653-951716 [+] UCSC
Mir-12073 scaffold_111: 952329-952402 [+] UCSC
Mir-433 scaffold_111: 952524-952597 [+] UCSC
Mir-127 scaffold_111: 953628-953683 [+] UCSC
Mir-432 scaffold_111: 955129-955197 [+] UCSC
Mir-136-v2 scaffold_111: 955349-955404 [+] UCSC
Mir-136-v1 scaffold_111: 955349-955404 [+] UCSC
Mir-370 scaffold_111: 977812-977869 [+] UCSC

Seed

UCAGAGU

Precursor
(pre-Mir +30nt flank)

ACCCUGCUCUGAGAAGUUGUCACUCUCAGAUUCAGAGUCGCUUGUCUCAUCCCGGGGGCAACCCCUUGUGGCUAAGAACAGGAUGGGACGCGCAACUCUGUUUCUGAAGGCUCUCUGGUUGUAGCAGCUCAUGA

Get precursor sequence

Structure

        10        20          30        40        50        60      
ACCCUGCUCUGAGAAGUUGUCA--|UC     UU      C  U          CGGGGGCAACCCC 
                        C  UCAGA  CAGAGU GC UGUCUCAUCC             U
                        G  AGUCU  GUCUCA CG GCAGGGUAGG             U
AGUACUCGACGAUGUUGGUCUCUC^GA     UU      A  C          ACAAGAAUCGGUG 
  130       120       110       100        90        80        70