MirGeneDB 2.1

MirGeneDB ID

Cel-Let-7-P7

Family name LET-7 (all species)
Seed GAGGUAG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-241
Paralogues Cel-Let-7-P5  Cel-Let-7-P6  Cel-Let-7-P8  Cel-Let-7-P9 
Orthologues Aae-Let-7  Bge-Let-7  Bpl-Let-7  Cbr-Let-7-P7  Cgi-Let-7  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(ce11)
chrV: 14366203-14366268 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Let-7-P7)
Let-7-P8 chrV: 14364435-14364494 [-] UCSC Ensembl
Let-7-P7 chrV: 14366203-14366268 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGUACCAAACCGCGGGGGUGUCAAAGUUGAGGUAGGUGCGAGAAAUGACGGCAUCCAUAUAGUAAUCGUUCAUUGUCUCUCAGCUGCUUCAUCUGUGACAUGGCUACGCUAUUUUUUUCACUU
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Structure
        10        20          30        40         50        60  
UUUUGUACCAAACCGCGGGG--      A  U        G  C    -|    CGGCAUCCAU 
                      GUGUCA AG UGAGGUAG UG GAGA AAUGA          \
                      UACAGU UC ACUUCGUC AC CUCU UUACU          A
UUCACUUUUUUUAUCGCAUCGG      G  U        G  U    G^    UGCUAAUGAU 
    120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Let-7-P7_5p

mirBase accessionMIMAT0000297
Sequence
0- UGAGGUAGGUGCGAGAAAUGA -21
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Proposed targets microrna.org: MIMAT0000297
TargetScanWorm: cel-miR-241
Star sequence

Cel-Let-7-P7_3p*

mirBase accessionMIMAT0020335
Sequence
44- AUUGUCUCUCAGCUGCUUCAUC -66
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