MirGeneDB 2.1

MirGeneDB ID

Cel-Let-7-P6

Family name LET-7 (all species)
Seed GAGGUAG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-84
Paralogues Cel-Let-7-P5  Cel-Let-7-P7  Cel-Let-7-P8  Cel-Let-7-P9 
Orthologues Aae-Let-7  Asu-Let-7-P6  Bge-Let-7  Bpl-Let-7  Cbr-Let-7-P6  Cgi-Let-7  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7 
Node of Origin (locus) Chromadorea
Node of Origin (family) Bilateria
Genome context
(ce11)
chrX: 16022410-16022470 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUAUUCAUCAUACGUCUGCCUGUGGCAUCUGAGGUAGUAUGUAAUAUUGUAGACUGUCUAUAAUGUCCACAAUGUUUCAACUAACUCGGCUGUUCUGUUGAGACAUGUAUAUGUUUUUGU
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Structure
        10        20          30        40        50        60
ACUAUUCAUCAUACGUCUGCCUGU--|   U     G    A  U        A  CUGUC 
                          GGCA CUGAG UAGU UG AAUAUUGU GA     U
                          UUGU GGCUC AUCA AC UUGUAACA CU     A
UGUUUUUGUAUAUGUACAGAGUUGUC^   C     A    -  U        C  GUAAU 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Let-7-P6_5p

mirBase accessionMIMAT0000057
Sequence
0- UGAGGUAGUAUGUAAUAUUGUAGA -24
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Proposed targets microrna.org: MIMAT0000057
TargetScanWorm: cel-miR-84
Star sequence

Cel-Let-7-P6_3p*

mirBase accessionMIMAT0015110
Sequence
38- CACAAUGUUUCAACUAACUCGGC -61
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Proposed targets microrna.org: MIMAT0015110