MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-124-P9

Family name MIR-124 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-124a
Paralogues Cbr-Mir-124-P10  Cbr-Mir-124-P11 
Orthologues Aae-Mir-124  Aga-Mir-124  Agr-Mir-124  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bko-Mir-124  Bla-Mir-124  Bpl-Mir-124  Cel-Mir-124  Cte-Mir-124  Dan-Mir-124  Dlo-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dsi-Mir-124  Dya-Mir-124  Eba-Mir-124  Egr-Mir-124-o9  Esc-Mir-124  Gpa-Mir-124  Gsp-Mir-124  Hme-Mir-124  Hru-Mir-124  Isc-Mir-124  Lan-Mir-124  Lhy-Mir-124  Llo-Mir-124  Mgi-Mir-124  Mom-Mir-124  Npo-Mir-124  Obi-Mir-124  Ofu-Mir-124  Ovu-Mir-124  Pau-Mir-124  Pdu-Mir-124  Pfl-Mir-124  Pmi-Mir-124  Pve-Mir-124  Sko-Mir-124  Sma-Mir-124  Sne-Mir-124  Snu-Mir-124  Spu-Mir-124  Sro-Mir-124  Tca-Mir-124  War-Mir-124  Xbo-Mir-124 
Node of Origin (locus) C. briggsae
Node of Origin (family) Bilateria
Genome context
(CB4)		 IV: 8910174-8910237 [+] Ensembl
Seed AAGGCAC
Precursor
(pre-Mir +30nt flank)		 
CAUUGAUACAUUUUUUCCAGUCGUCAUAUGGCGUCCACCUGAGUGACUUUAGUGGACAUGUAUAGUUUCCAACUAAGGCACGCGGUGAAUGCCACGUGGCAAUUCUGGGAUUCAGAAGGUUGGU
Get precursor sequence
Structure
        10        20          30        40        50        60  
CAUUGAUACAUUUUUUCCAGUC--|   UA      C    UGA   A       GGACAUGU 
                        GUCA  UGGCGU CACC   GUG CUUUAGU        A
                        CGGU  ACCGUA GUGG   CAC GGAAUCA        U
UGGUUGGAAGACUUAGGGUCUUAA^   GC      A    CG-   -       ACCUUUGA 
  120       110       100        90         80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-124-P9_5p*
mirBase accessionNone
Sequence 
0- GCGUCCACCUGAGUGACUUUAGU -23
Get sequence
Mature sequence

Cbr-Mir-124-P9_3p
mirBase accessionMIMAT0000494
Sequence 
43- UAAGGCACGCGGUGAAUGCCA -64
Get sequence