MirGeneDB 3.0
12 Xenopus laevis microRNA genes with seed AGUGCAA (all species)
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Eg Em Em He Ki Re St St
Xla-Mir-130-P1a3 xla-mir-130c-2 MIR-130 AGUGCAA MIMAT0046445 MIMAT0046446 NC_030724.1 153961037 153961095 - X. laevis Vertebrata No
Xla-Mir-130-P1a4 xla-mir-130c-1 MIR-130 AGUGCAA MIMAT0046445 MIMAT0046446 NC_030725.1 126921116 126921174 - X. laevis Vertebrata No
Xla-Mir-130-P1b3 xla-mir-130a MIR-130 AGUGCAA MIMAT0046441 MIMAT0046442 NC_030726.1 93401048 93401112 + X. laevis Vertebrata No 1 1
Xla-Mir-130-P1b4 None MIR-130 AGUGCAA None None NC_030727.1 78407994 78408057 + X. laevis Vertebrata No 1 1
Xla-Mir-130-P2a3 None MIR-130 AGUGCAA None None NC_030724.1 153960220 153960282 - X. laevis Vertebrata No 1 1
Xla-Mir-130-P2a4 None MIR-130 AGUGCAA None None NC_030725.1 126920251 126920313 - X. laevis Vertebrata No 1 1
Xla-Mir-130-P2b3 xla-mir-301-1 MIR-130 AGUGCAA MIMAT0046566 MIMAT0046567 NC_030726.1 93401257 93401319 + X. laevis Vertebrata Yes 1
Xla-Mir-130-P2b4 xla-mir-301-2 MIR-130 AGUGCAA MIMAT0046566 MIMAT0046567 NC_030726.1 93401258 93401319 + X. laevis Vertebrata Yes 1
Xla-Mir-130-P3a3 None MIR-130 AGUGCAA None None NC_030724.1 153953774 153953837 - X. laevis Vertebrata No
Xla-Mir-130-P3a4 None MIR-130 AGUGCAA None None NC_030725.1 126914978 126915041 - X. laevis Vertebrata No
Xla-Mir-130-P4a3 None MIR-130 AGUGCAA None None NC_030724.1 153951773 153951832 - X. laevis Vertebrata No 1 1
Xla-Mir-130-P4a4 xla-mir-130b MIR-130 AGUGCAA MIMAT0046443 MIMAT0046444 NC_030725.1 126913055 126913114 - X. laevis Vertebrata No 1 1

(red - mature/co-mature, blue - star)

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