MirGeneDB 3.0

9 Tribolium castaneum microRNA genes with seed AUCACAG (all species)
Sort by genome coordinates Motifs Tissue expression
- +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Tca-Mir-2-P8 tca-mir-308 MIR-2 AUCACAG MIMAT0018706 MIMAT0018707 LG2 4737006 4737062 - Aparaglossata Protostomia No 1 1
Tca-Mir-2-P7 tca-mir-11 MIR-2 AUCACAG MIMAT0018854 MIMAT0018855 LG5 7197519 7197576 + Neoptera Protostomia No 1 1
Tca-Mir-2-P5e tca-mir-2944c MIR-2 AUCACAG MIMAT0018810 MIMAT0018811 LG9 10977 11036 - T. castaneum Protostomia No 1
Tca-Mir-2-P5d tca-mir-2944b MIR-2 AAGGAAC MIMAT0018746 MIMAT0018747 LG5 7455840 7455901 + T. castaneum Protostomia No 1
Tca-Mir-2-P5c tca-mir-2944a MIR-2 AUCACAG MIMAT0018718 MIMAT0018719 LG3 15689938 15689994 + T. castaneum Protostomia No 1
Tca-Mir-2-P4 V tca-mir-2-2 MIR-2 AUCACAG MIMAT0019096 MIMAT0008353 LG3 561350 561410 + Arthropoda Protostomia 2 No 1 1
Tca-Mir-2-P3 V tca-mir-2-1 MIR-2 AUCACAG MIMAT0019094 MIMAT0008353 LG3 561200 561258 + Arthropoda Protostomia 2 No 1
Tca-Mir-2-P2b tca-mir-13b MIR-2 AUCACAG MIMAT0019104 MIMAT0008360 LG3 561066 561124 + Neoptera Protostomia No 1
Tca-Mir-2-P2a tca-mir-13a MIR-2 AUCACAG MIMAT0019103 MIMAT0008359 LG3 560954 561011 + Neoptera Protostomia No 1 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix