MirGeneDB 3.0

6 Latimeria chalumnae microRNA genes with seed ACAUUCA (all species)
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Lch-Mir-181-P1a None MIR-181 ACAUUCA None None JH127371.1 200037 200097 - Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-181-P1b None MIR-181 ACAUUCA None None JH126572.1 3687977 3688037 - Gnathostomata Vertebrata Unknown 1
Lch-Mir-181-P1c None MIR-181 ACAUUCA None None JH126758.1 817111 817172 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-181-P2a None MIR-181 ACAUUCA None None JH127371.1 199853 199914 - Gnathostomata Vertebrata Unknown
Lch-Mir-181-P2b None MIR-181 ACAUUCA None None JH126572.1 3682113 3682171 - Gnathostomata Vertebrata Unknown
Lch-Mir-181-P2c None MIR-181 ACAUUCA None None JH126758.1 823305 823368 + Gnathostomata Vertebrata Unknown 1 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix