MirGeneDB 2.1

22 microRNA genes with seed AGGUCCA
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-2188 aca-mir-2188 MIR-2188 AGGUCCA MIMAT0021882 MIMAT0021883 GL343545.1 105074 105134 - Gnathostomata Gnathostomata No 1
Ami-Mir-2188 ami-mir-2188 MIR-2188 AGGUCCA MIMAT0038333 MIMAT0038334 NW_017709304.1 9754 9813 + Gnathostomata Gnathostomata No
Cli-Mir-2188 cli-mir-2188 MIR-2188 AGGUCCA MIMAT0038709 MIMAT0038710 scaffold497 1693231 1693290 - Gnathostomata Gnathostomata No
Cmi-Mir-2188 None MIR-2188 AGGUCCA None None KI636151.1 89377 89436 - Gnathostomata Gnathostomata No
Cpi-Mir-2188 cpi-mir-2188 MIR-2188 AGGUCCA MIMAT0037943 MIMAT0037944 JH584511 3220744 3220802 - Gnathostomata Gnathostomata No
Dre-Mir-2188 dre-mir-2188 MIR-2188 AGGUCCA MIMAT0011309 MIMAT0011310 chr5 69021881 69021940 - Gnathostomata Gnathostomata Yes 1 1
Gga-Mir-2188 gga-mir-2188 MIR-2188 AGGUCCA MIMAT0016372 MIMAT0027028 22 2948515 2948574 - Gnathostomata Gnathostomata No
Gja-Mir-2188 None MIR-2188 AGGUCCA None None NW_015164186.1 1585193 1585252 + Gnathostomata Gnathostomata Unknown
Gmo-Mir-2188 gmo-mir-2188 MIR-2188 AGGUCCA MIMAT0044013 MIMAT0044014 contig159248 350 409 - Gnathostomata Gnathostomata No 1 1
Lch-Mir-2188 None MIR-2188 AGGUCCA None None JH127420.1 655957 656016 + Gnathostomata Gnathostomata Unknown
Loc-Mir-2188 None MIR-2188 AGGUCCA None None LG1 8279999 8280058 + Gnathostomata Gnathostomata Yes
Mal-Mir-2188 None MIR-2188 AGGUCCA None None KV884744.1 2550294 2550353 + Gnathostomata Gnathostomata No 1 1
Mun-Mir-2188 None MIR-2188 AGGUCCA None None 2188_LR594635.1:335100677-335100818 42 101 - Gnathostomata Gnathostomata Unknown
Oan-Mir-2188 None MIR-2188 AGGUCCA None None NC_041732.1 40060949 40061008 - Gnathostomata Gnathostomata No
Pbv-Mir-2188 pbv-mir-2188 MIR-2188 AGGUCCA MIMAT0039089 MIMAT0039090 KE955095.1 150232 150292 - Gnathostomata Gnathostomata No 1
Spt-Mir-2188 None MIR-2188 AGGUCCA None None QEPC01010930.1 773536 773595 - Gnathostomata Gnathostomata Unknown
Sto-Mir-2188 None MIR-2188 AGGUCCA None None BFAA01112839.1 244 303 + Gnathostomata Gnathostomata Unknown 1
Tgu-Mir-2188 tgu-mir-2188 MIR-2188 AGGUCCA MIMAT0014480 MIMAT0026967 22 177671 177730 + Gnathostomata Gnathostomata No
Tni-Mir-2188 None MIR-2188 AGGUCCA None None 12 6747621 6747680 - Gnathostomata Gnathostomata No 1 1
Xtr-Mir-2188 xtr-mir-2188 MIR-2188 AGGUCCA MIMAT0012193 None chr3 120050654 120050711 - Gnathostomata Gnathostomata Yes 1 1
Xla-Mir-2188-P1 None MIR-2188 AGGUCCA None None NC_030728.1 123489911 123489968 - X. laevis Gnathostomata Unknown 1 1
Xla-Mir-2188-P2 None MIR-2188 AGGUCCA None None NC_030729.1 22116209 22116266 + X. laevis Gnathostomata Unknown 1 1

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