Mir
Gene
DB
2.1
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86 microRNA genes of family MIR-31
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
▲
CNNC
Tgu-Mir-31
tgu-mir-31
MIR-31
GGCAAGA
MIMAT0014615
None
Z
40389641
40389699
+
Bilateria
Bilateria
Unknown
1
Cgi-Mir-31
None
MIR-31
GGCAAGA
None
None
scaffold211
287343
287398
-
Bilateria
Bilateria
No
1
Hsa-Mir-31
hsa-mir-31
MIR-31
GGCAAGA
MIMAT0000089
MIMAT0004504
chr9
21512120
21512178
-
Bilateria
Bilateria
No
1
1
Ami-Mir-31
ami-mir-31
MIR-31
GGCAAGA
MIMAT0038088
MIMAT0038089
NW_017714378.1
656460
656518
+
Bilateria
Bilateria
No
1
Aae-Mir-31
aae-mir-31
MIR-31
GGCAAGA
MIMAT0014276
None
supercont1.636
483222
483279
-
Bilateria
Bilateria
No
1
1
Npo-Mir-31
None
MIR-31
GGCAAGA
None
None
JACATO010001526.1
8601
8658
+
Bilateria
Bilateria
Unknown
1
1
Mml-Mir-31
mml-mir-31
MIR-31
GGCAAGA
MIMAT0002379
MIMAT0026577
chr15
62389954
62390012
+
Bilateria
Bilateria
No
1
1
Cpi-Mir-31
cpi-mir-31
MIR-31
GGCAAGA
MIMAT0037685
MIMAT0037686
JH584648
133182
133240
-
Bilateria
Bilateria
No
1
Ebu-Mir-31
None
MIR-31
GGCAAGA
None
None
FYBX02009555.1
311839
311894
+
Bilateria
Bilateria
Unknown
1
Hme-Mir-31
None
MIR-31
GGCAAGA
None
None
FASA01202097.1
1291
1349
+
Bilateria
Bilateria
Unknown
1
Esc-Mir-31
None
MIR-31
GGCAAGA
None
None
Esc-Mir-31_pre_SRIE01056511.1:577766-577909
44
101
-
Bilateria
Bilateria
No
1
Mmu-Mir-31
mmu-mir-31
MIR-31
GGCAAGA
MIMAT0000538
MIMAT0004634
chr4
88910577
88910635
-
Bilateria
Bilateria
No
1
Aca-Mir-31
aca-mir-31
MIR-31
GGCAAGA
MIMAT0021930
MIMAT0021931
2
61607441
61607499
+
Bilateria
Bilateria
No
1
Tca-Mir-31
tca-mir-31
MIR-31
GGCAAGA
MIMAT0008362
MIMAT0019106
LG7
5938429
5938486
+
Bilateria
Bilateria
No
1
Obi-Mir-31
None
MIR-31
GGCAAGA
None
None
KQ420998
42911
42968
+
Bilateria
Bilateria
No
1
Rno-Mir-31
rno-mir-31a
MIR-31
GGCAAGA
MIMAT0000810
MIMAT0017102
chr5
107206542
107206600
+
Bilateria
Bilateria
No
1
1
Pbv-Mir-31
pbv-mir-31
MIR-31
GGCAAGA
MIMAT0038880
None
KE958157.1
9910
9969
-
Bilateria
Bilateria
Unknown
Cin-Mir-31
cin-mir-31
MIR-31
GGCAAGA
MIMAT0006092
None
HT000111.1
89204
89265
-
Bilateria
Bilateria
No
1
1
Bge-Mir-31
None
MIR-31
GGCAAGA
None
None
KZ614513.1
1183518
1183577
+
Bilateria
Bilateria
No
1
Ovu-Mir-31
None
MIR-31
GGCAAGA
None
None
RXHP01072362.1
30367
30424
+
Bilateria
Bilateria
No
1
Cpo-Mir-31
cpo-mir-31
MIR-31
GGCAAGA
MIMAT0046914
MIMAT0046915
scaffold_2
600471
600529
-
Bilateria
Bilateria
No
1
Bfl-Mir-31
bfl-mir-31
MIR-31
GGCAAGA
MIMAT0009473
MIMAT0019141
NC_049993.1
300554
300614
-
Bilateria
Bilateria
No
Dpu-Mir-31
dpu-mir-31
MIR-31
GGCAAGA
MIMAT0012659
None
gnl_ti_814293389_AZSH327271
39
100
-
Bilateria
Bilateria
No
Ocu-Mir-31
ocu-mir-31
MIR-31
GGCAAGA
MIMAT0048161
MIMAT0048162
chr1
32242014
32242072
+
Bilateria
Bilateria
No
1
1
Spt-Mir-31
None
MIR-31
GGCAAGA
None
None
QEPC01007029.1
122371
122429
+
Bilateria
Bilateria
Unknown
1
Bla-Mir-31
None
MIR-31
GGCAAGA
None
None
Sc0000399
174416
174477
+
Bilateria
Bilateria
No
1
Dma-Mir-31
None
MIR-31
GGCAAGA
None
None
NC_046175.1
12368730
12368791
-
Bilateria
Bilateria
No
Cfa-Mir-31
cfa-mir-31
MIR-31
GGCAAGA
MIMAT0006599
None
chr11
40904438
40904496
-
Bilateria
Bilateria
No
1
Sko-Mir-31
sko-mir-31
MIR-31
GGCAAGA
MIMAT0009614
None
NW_003132358.1
76906
76966
+
Bilateria
Bilateria
Unknown
1
Bpl-Mir-31
None
MIR-31
GGCAAGA
None
None
QEOQ01000345.1
929582
929639
+
Bilateria
Bilateria
No
1
Bta-Mir-31
bta-mir-31
MIR-31
GGCAAGA
MIMAT0003548
None
NC_037335.1
22502386
22502444
+
Bilateria
Bilateria
No
1
1
Xtr-Mir-31
xtr-mir-31a
MIR-31
GGCAAGA
MIMAT0003679
None
chr1
108909690
108909748
-
Bilateria
Bilateria
Unknown
1
Pfl-Mir-31
None
MIR-31
GGCAAGA
None
None
LD342794.1
648341
648399
-
Bilateria
Bilateria
Unknown
1
Dno-Mir-31
dno-mir-31
MIR-31
GGCAAGA
MIMAT0047567
MIMAT0047568
JH566723
525341
525399
-
Bilateria
Bilateria
No
1
1
Spu-Mir-31
spu-mir-31
MIR-31
GGCAAGA
MIMAT0009657
None
AAGJ06000003.1
38236646
38236708
-
Bilateria
Bilateria
No
1
Ete-Mir-31
None
MIR-31
GGCAAGA
None
None
JH980317
14279606
14279664
-
Bilateria
Bilateria
No
1
1
Cel-Mir-31
cel-mir-72
MIR-31
GGCAAGA
MIMAT0000044
MIMAT0020318
chrII
2452854
2452919
+
Bilateria
Bilateria
No
Sha-Mir-31
None
MIR-31
GGCAAGA
None
None
GL842851.1
1681
1739
+
Bilateria
Bilateria
No
1
Tni-Mir-31
None
MIR-31
GGCAAGA
None
None
Un_random
12278863
12278922
-
Bilateria
Bilateria
Unknown
1
Xbo-Mir-31
None
MIR-31
GGCAAGA
None
None
3C-assembly_contig_1893
936263
936322
+
Bilateria
Bilateria
No
1
Cbr-Mir-31
cbr-mir-72
MIR-31
GGCAGAU
MIMAT0000694
None
II
14785990
14786080
-
Bilateria
Bilateria
No
Mdo-Mir-31
mdo-mir-31
MIR-31
GGCAAGA
MIMAT0004094
MIMAT0026653
6
35734645
35734703
-
Bilateria
Bilateria
No
1
Gmo-Mir-31
gmo-mir-31
MIR-31
GGCAAGA
MIMAT0044100
None
GeneScaffold_1111
103251
103306
-
Bilateria
Bilateria
No
1
1
Asu-Mir-31
asu-mir-72
MIR-31
GGCAAGA
MIMAT0021468
MIMAT0021469
Scaffold618
63636
63697
+
Bilateria
Bilateria
No
Oan-Mir-31
oan-mir-31
MIR-31
GGCAAGA
MIMAT0007111
MIMAT0007112
NC_041750.1
18353075
18353133
+
Bilateria
Bilateria
No
1
Mal-Mir-31
None
MIR-31
GGCAAGA
None
None
KV885014.1
317072
317131
+
Bilateria
Bilateria
No
1
Cte-Mir-31
cte-mir-31
MIR-31
GGCAAGA
MIMAT0009515
None
CAPTEscaffold_43
86484
86544
-
Bilateria
Bilateria
Unknown
1
Gga-Mir-31
gga-mir-31
MIR-31
GGCAAGA
MIMAT0001189
MIMAT0026549
Z
78732018
78732076
-
Bilateria
Bilateria
No
1
Dre-Mir-31
dre-mir-31
MIR-31
GGCAAGA
MIMAT0003347
None
chr7
73263755
73263815
-
Bilateria
Bilateria
No
1
Efe-Mir-31
None
MIR-31
GGCAAGA
None
None
Efet.01.174306
5298
5359
+
Bilateria
Bilateria
No
1
1
Cli-Mir-31
cli-mir-31
MIR-31
GGCAAGA
MIMAT0038460
MIMAT0038461
scaffold476
622320
622378
+
Bilateria
Bilateria
No
1
Lgi-Mir-31
lgi-mir-31
MIR-31
GGCAAGA
MIMAT0009566
None
LOTGIsca_62
866087
866148
-
Bilateria
Bilateria
Unknown
1
Dmo-Mir-31-P1
dmo-mir-31a
MIR-31
GGCAAGA
MIMAT0008677
None
scaffold_6496
11065485
11065551
+
Drosophila
Bilateria
No
1
Dme-Mir-31-P1
dme-mir-31a
MIR-31
GGCAAGA
MIMAT0000400
MIMAT0020834
2R
17783806
17783873
-
Drosophila
Bilateria
No
1
Dsi-Mir-31-P1
dsi-mir-31a
MIR-31
GGCAAGA
MIMAT0008886
None
2R
14317360
14317427
-
Drosophila
Bilateria
No
1
Dya-Mir-31-P1
dya-mir-31a
MIR-31
GGCAAGA
MIMAT0009103
None
2R
15512035
15512102
+
Drosophila
Bilateria
No
1
Dan-Mir-31-P1
dan-mir-31a
MIR-31
GGCAAGA
MIMAT0008477
None
scaffold_13266
10515624
10515691
+
Drosophila
Bilateria
No
1
Dmo-Mir-31-P2
dmo-mir-31b
MIR-31
GGCAAGA
MIMAT0008639
None
scaffold_6473
5711164
5711265
+
Drosophila
Bilateria
Unknown
1
Dme-Mir-31-P2
dme-mir-31b
MIR-31
GGCAAGA
MIMAT0000389
MIMAT0020825
X
8993317
8993418
-
Drosophila
Bilateria
No
Dsi-Mir-31-P2
dsi-mir-31b
MIR-31
GGCAAGA
MIMAT0008878
None
X
8424731
8424832
-
Drosophila
Bilateria
No
Dya-Mir-31-P2
dya-mir-31b
MIR-31
GGCAAGA
MIMAT0009104
None
X
12425708
12425809
+
Drosophila
Bilateria
No
Dan-Mir-31-P2
dan-mir-31b
MIR-31
GGCAAGA
MIMAT0008469
None
scaffold_13047
712447
712538
-
Drosophila
Bilateria
No
Pmi-Mir-31-P4
pmi-mir-31-1
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
21556
21616
+
P. miniata
Bilateria
No
Loc-Mir-31-P8
None
MIR-31
GGCAAGA
None
None
LG4
45815911
45815970
+
L. oculatus
Bilateria
No
1
Loc-Mir-31-P9
None
MIR-31
GGCAAGA
None
None
LG4
59481960
59482019
+
L. oculatus
Bilateria
No
Gja-Mir-31-P10
None
MIR-31
GGCAAGA
None
None
NW_015164226.1
388838
388896
-
G. japonicus
Bilateria
No
1
Gja-Mir-31-P11
None
MIR-31
GGCAAGA
None
None
NW_015201646.1
532
590
+
G. japonicus
Bilateria
Unknown
1
Gja-Mir-31-P12
None
MIR-31
GGCAAGA
None
None
NW_015164669.1
1784561
1784619
+
G. japonicus
Bilateria
Unknown
1
Lpo-Mir-31-P13
None
MIR-31
GGCAAGA
None
None
NW_013665962.1
603790
603849
+
L. polyphemus
Bilateria
Unknown
1
Lpo-Mir-31-P14
None
MIR-31
GGCAAGA
None
None
NW_013666545.1
334431
334488
+
L. polyphemus
Bilateria
Unknown
1
Lpo-Mir-31-P15
None
MIR-31
GGCAAGA
None
None
NW_013665624.1
176533
176592
+
L. polyphemus
Bilateria
Unknown
1
Lpo-Mir-31-P16
None
MIR-31
GGCAAGA
None
None
NW_013674433.1
14547
14606
+
L. polyphemus
Bilateria
Unknown
1
Xla-Mir-31-P17
None
MIR-31
GGCAAGA
None
None
NC_030724.1
118648966
118649024
-
X. laevis
Bilateria
No
1
Xla-Mir-31-P18
None
MIR-31
GGCAAGA
None
None
NC_030725.1
98082247
98082304
-
X. laevis
Bilateria
Unknown
1
Sme-Mir-31-P19
sme-mir-31a
MIR-31
GGCAAGA
MIMAT0003979
MIMAT0012104
NNSW01000098_dd_Smes_g4_98
1507690
1507758
-
S. mediterranea
Bilateria
No
1
Sme-Mir-31-P20
sme-mir-31b-1
MIR-31
GGCAAGA
MIMAT0003980
MIMAT0011413
NNSW01000043_dd_Smes_g4_43
2461898
2461958
-
S. mediterranea
Bilateria
Unknown
1
Pmi-Mir-31-P5a
pmi-mir-31-3
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
22547
22607
+
P. miniata
Bilateria
No
1
Pmi-Mir-31-P5b
pmi-mir-31-3
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
22547
22607
+
P. miniata
Bilateria
No
1
Sto-Mir-31
None
MIR-31
GGCAAGA
None
None
BFAA01001118.1
548365
548422
-
Bilateria
Bilateria
Yes
1
1
Cmi-Mir-31
None
MIR-31
GGCAAGA
None
None
KI635929.1
1945683
1945740
+
Bilateria
Bilateria
Yes
1
1
Isc-Mir-31
None
MIR-31
GGCAAGA
None
None
DS657582
482
543
+
Bilateria
Bilateria
Unknown
1
1
Mun-Mir-31
None
MIR-31
GGCAAGA
None
None
31_LR594633.1:281890332-281890474
43
101
-
Bilateria
Bilateria
Unknown
1
1
Lch-Mir-31
None
MIR-31
GGCAAGA
None
None
JH128150.1
522982
523040
-
Bilateria
Bilateria
Unknown
1
1
Pmi-Mir-31-P3
pmi-mir-31-2
MIR-31
GGCAAGA
MIMAT0032147
None
JH770732.1
21164
21227
+
P. miniata
Bilateria
No
1
1
Lan-Mir-31-P6
None
MIR-31
GGCAAGA
None
None
LFEI01001401
4745
4804
+
L. anatina
Bilateria
Unknown
1
1
Lan-Mir-31-P7
None
MIR-31
GGCAAGA
None
None
LFEI01000149
78473
78532
-
L. anatina
Bilateria
Unknown
1
1
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