MirGeneDB ID | Tgu-Mir-726 |
Family name |
MIR-726 (all species) |
Seed |
UCACUAC |
Species |
Zebra finch (Taeniopygia guttata) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aca-Mir-726
Cpi-Mir-726
Dre-Mir-726
Gga-Mir-726
Gja-Mir-726
Loc-Mir-726
Mal-Mir-726
Spt-Mir-726
Tni-Mir-726
Xla-Mir-726-P1
Xla-Mir-726-P2
Xtr-Mir-726
|
Node of Origin (locus) |
Osteichthyes
|
Node of Origin (family) |
Osteichthyes
|
Genome context (TaeGut1_add) |
RRCB01000041.1: 626298-626356 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCCCCCGUGUCCCCCCGGGCCGUGCAGUCGGAAUUCCGCUAGUUCUGAACUUUUUCCUGGAAAAAAGCUCACUACUGGCAGAACUCGGCCGCGCGCCCCACUGCGGGGGCACCCGGGG
Get precursor sequence
|
Structure | 10 20 30 40 50
CCCCCCCGUGUCCCCCC--| C A AA C UC A UUUUCC
GGG CGUGC GUCGG UUC GCUAGU UGA CU U
CCC GCGCG CGGCU AAG CGGUCA ACU GA G
GGGGCCCACGGGGGCGUCA^ C C C- A UC C AAAAAG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Tgu-Mir-726_5p* |
mirBase accession | None |
Sequence |
0- GGAAUUCCGCUAGUUCUGAACU -22
Get sequence
|
Mature sequence |
Tgu-Mir-726_3p |
mirBase accession | None |
Sequence |
38- CUCACUACUGGCAGAACUCGG -59
Get sequence
|