MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-726

Family name MIR-726 (all species)
Seed UCACUAC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-726
Paralogues
Orthologues Aca-Mir-726  Dre-Mir-726  Gga-Mir-726  Gja-Mir-726  Loc-Mir-726  Mal-Mir-726  Spt-Mir-726  Tgu-Mir-726  Tni-Mir-726  Xla-Mir-726-P1  Xla-Mir-726-P2  Xtr-Mir-726 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(chrPic1)
JH584439: 94889-94949 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUGUCCCCCAUCUCUGGGGCGUUCACCAGGAAUUCCGCUAGUUCUGAACUAUUUACACUUGAAAAAAGUUCACUACUAGCAGAACUCGGGUGCGCGCCCCCCAACAUCGCAGUGGGGCA
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Structure
        10          20        30        40        50        60
CCUUGUCCCCCAUCUCU--|      U    AG  A   C      UC      AUUUACA 
                   GGGGCGU CACC  GA UUC GCUAGU  UGAACU       C
                   CCCCGCG GUGG  CU AAG CGAUCA  ACUUGA       U
ACGGGGUGACGCUACAACC^      C    G-  C   A      UC      AAAAAGU 
 .       110       100        90         80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Te Te Te To
Star sequence

Cpi-Mir-726_5p*

mirBase accessionNone
Sequence
0- GGAAUUCCGCUAGUUCUGAACUA -23
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Mature sequence

Cpi-Mir-726_3p

mirBase accessionMIMAT0037907
Sequence
40- UUCACUACUAGCAGAACUCGG -61
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