| MirGeneDB ID | Aca-Mir-726 |
|---|
| Family name |
MIR-726 (all species) |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-726
|
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| Paralogues |
|
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| Orthologues |
Cpi-Mir-726
Dre-Mir-726
Gga-Mir-726
Gja-Mir-726
Loc-Mir-726
Mal-Mir-726
Spt-Mir-726
Tgu-Mir-726
Tni-Mir-726
Xla-Mir-726-P1
Xla-Mir-726-P2
Xtr-Mir-726
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
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| Node of Origin (family) |
Osteichthyes
|
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Genome context
(anoCar2) |
2: 88642252-88642312 [-]
UCSC
Ensembl
|
|---|
| Seed |
UCACUAC |
|---|
Precursor
(pre-Mir +30nt flank) |
CCCCCCUCCCAGCUUUCUGGGCGCUCGUCAGGAAUUCCGCUAGUUCUGAACUAUUUACAGUUAGAAAAAGUUCACUACUAGCAGAACUCGGCCGCGCGCUCUUCACUCUUCGGGGGUCAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCCCCCUCCCAGCUUUCU-- U -| AG A C UC AUUUACA
GGGCGC C GUC GA UUC GCUAGU UGAACU G
CUCGCG G CGG CU AAG CGAUCA ACUUGA U
GAACUGGGGGCUUCUCACUU C C^ -- C A UC AAAAGAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Aca-Mir-726_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGAAUUCCGCUAGUUCUGAACU -22
Get sequence
|
|---|
| Mature sequence |
Aca-Mir-726_3p |
| mirBase accession | MIMAT0021986 |
|---|
| Sequence |
40- UUCACUACUAGCAGAACUCGG -61
Get sequence
|
|---|
