MirGeneDB ID | Gga-Mir-726 |
Family name |
MIR-726 (all species) |
Species |
Chicken (Gallus gallus) |
MiRBase ID |
gga-mir-726
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Paralogues |
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Orthologues |
Aca-Mir-726
Cpi-Mir-726
Dre-Mir-726
Gja-Mir-726
Loc-Mir-726
Mal-Mir-726
Spt-Mir-726
Tgu-Mir-726
Tni-Mir-726
Xla-Mir-726-P1
Xla-Mir-726-P2
Xtr-Mir-726
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Node of Origin (locus) |
Osteichthyes
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Node of Origin (family) |
Osteichthyes
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Genome context (Gallus_gallus.GRCg6a) |
KZ626833.1: 219368-219424 [+]
UCSC
Ensembl
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Seed |
UCACCAC |
Precursor (pre-Mir +30nt flank) |
GGGCAGCGCCCGCCGUGGGGCCGUGCGACGGGAAUUCCGCCCGUUCUGAGCUCUGGAGGCGCUGAGUUCACCACCGGCAGAACUCGGCCGCGCGACCCCCAUCCGUGGGGCAGCUGU
Get precursor sequence
|
Structure | 10 20 30 40 50
GGGCAGCGCCCGCCGUG-- C A-| AA C C UC CUGGA
GGG CGUGCG CGGG UUC GCC GU UGAGCU G
CCC GCGCGC GCUC AAG CGG CA ACUUGA G
UGUCGACGGGGUGCCUACC A CG^ -- A C CC GUCGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Ad |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Gg |
He |
He |
Hy |
Hy |
Ki |
Ki |
Li |
Li |
Lu |
Lu |
Ov |
Pr |
Pr |
Sc |
Sc |
Sp |
Sp |
Te |
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Star sequence |
Gga-Mir-726_5p* |
mirBase accession | MIMAT0050085 |
Sequence |
0- GGAAUUCCGCCCGUUCUGAGCU -22
Get sequence
|
Mature sequence |
Gga-Mir-726_3p |
mirBase accession | MIMAT0050086 |
Sequence |
36- UUCACCACCGGCAGAACUCGG -57
Get sequence
|