MirGeneDB 3.0

MirGeneDB ID

Gga-Mir-726

Family name MIR-726 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-726
Paralogues
Orthologues Aca-Mir-726  Cpi-Mir-726  Dre-Mir-726  Gja-Mir-726  Loc-Mir-726  Mal-Mir-726  Spt-Mir-726  Tgu-Mir-726  Tni-Mir-726  Xla-Mir-726-P1  Xla-Mir-726-P2  Xtr-Mir-726 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Gallus_gallus.GRCg6a)
KZ626833.1: 219368-219424 [+] UCSC Ensembl
Seed UCACCAC
Precursor
(pre-Mir +30nt flank)
GGGCAGCGCCCGCCGUGGGGCCGUGCGACGGGAAUUCCGCCCGUUCUGAGCUCUGGAGGCGCUGAGUUCACCACCGGCAGAACUCGGCCGCGCGACCCCCAUCCGUGGGGCAGCUGU
Get precursor sequence
Structure
        10          20         30        40        50        
GGGCAGCGCCCGCCGUG--   C      A-|   AA   C   C  UC      CUGGA 
                   GGG CGUGCG  CGGG  UUC GCC GU  UGAGCU     G
                   CCC GCGCGC  GCUC  AAG CGG CA  ACUUGA     G
UGUCGACGGGGUGCCUACC   A      CG^   --   A   C  CC      GUCGC 
     110       100        90          80        70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-726_5p*

mirBase accessionMIMAT0050085
Sequence
0- GGAAUUCCGCCCGUUCUGAGCU -22
Get sequence
Mature sequence

Gga-Mir-726_3p

mirBase accessionMIMAT0050086
Sequence
36- UUCACCACCGGCAGAACUCGG -57
Get sequence