MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-19-P2h

Family name MIR-19 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues Pma-Mir-19-P1g  Pma-Mir-19-P1h  Pma-Mir-19-P2g 
Orthologues
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046132.1: 1985769-1985843 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-19-P2h)		 Mir-17-P2h NC_046132.1: 1977198-1977260 [+] UCSC Ensembl
Mir-17-P3h-v1 NC_046132.1: 1979765-1979827 [+] UCSC Ensembl
Mir-17-P3h-v2 NC_046132.1: 1979766-1979827 [+] UCSC Ensembl
Mir-19-P1h NC_046132.1: 1980048-1980109 [+] UCSC Ensembl
Mir-17-P4h NC_046132.1: 1982814-1982876 [+] UCSC Ensembl
Mir-19-P2h NC_046132.1: 1985769-1985843 [+] UCSC Ensembl
Mir-92-P1h NC_046132.1: 1986098-1986160 [+] UCSC Ensembl
Seed GUGCAAA
Precursor
(pre-Mir +30nt flank)		 
AACAAAAAAAAGGAGCUGAGCGCUACGAUUAGUUUUGCAGGGUUUGCAGUCAGCCUCGGCUCGCAUCUUCCCUCCGACCUGCUGUGCAAAUCCAUGCAAAACUGAAUGUGGCUGCUUUAGGUUCGCCGUACAUUU
Get precursor sequence
Structure
        10         20         30         40        50        60       
AACAAAAAAAAGGAGCU-    -      A           -|        GU    CUCGGCUCGCAU 
                  GAGC GCUACG UUAGUUUUGCA GGGUUUGCA  CAGC            C
                  UUCG CGGUGU AGUCAAAACGU CCUAAACGU  GUCG            U
UUUACAUGCCGCUUGGAU    U      A           A^        --    UCCAGCCUCCCU 
   130       120       110       100        90          80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-19-P2h_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGGUUUGCAGUCAGC -24
Get sequence
Mature sequence

Pma-Mir-19-P2h_3p
mirBase accessionNone
Sequence 
52- UGUGCAAAUCCAUGCAAAACUGA -75
Get sequence