| MirGeneDB ID | Pab-Mir-95 |
|---|
| Family name |
MIR-95 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-95
Cfa-Mir-95
Cja-Mir-95
Cpo-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Laf-Mir-95
Mml-Mir-95
Mmr-Mir-95
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 4874902-4874958 [+]
UCSC
Ensembl
|
|---|
| Seed |
UCAACGG |
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Precursor
(pre-Mir +30nt flank) |
GUAGGAUUGUGACACCCAACACAGUGGGCACUCAAUAAAUGUCUGUUGAAUUGAAAUGCGUUACAUUCAACGGGUAUUUAUUGAGCACCCACUCUGUGCCAGACGCUGAGCGGGGCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUAGGAUUGUGACACCCA--| C CA GU UGAAAU
ACA AGUGGG CUCAAUAAAU CUGUUGAAU \
UGU UCACCC GAGUUAUUUA GGCAACUUA G
GCGGGGCGAGUCGCAGACCG^ C AC UG CAUUGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-95_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CUCAAUAAAUGUCUGUUGAAUU -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-95_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UUCAACGGGUAUUUAUUGAGCA -57
Get sequence
|
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