MirGeneDB ID | Bta-Mir-95 |
Family name |
MIR-95 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-95
|
Paralogues |
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Orthologues |
Cfa-Mir-95
Cja-Mir-95
Cpo-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Laf-Mir-95
Mml-Mir-95
Mmr-Mir-95
Pab-Mir-95
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037333.1: 114336300-114336356 [-]
UCSC
Ensembl
|
Seed |
UCAACGG |
Precursor (pre-Mir +30nt flank) |
GCAGGACUGUGACACUAAACACAGCGGGCGCUCAAUAAAUGUUUGUUGAAUUGAGAUGCGCUAAAUUCAACGGGUAUUUAUUGAGCACCCACUCUGUGCCAGACGCUGUGUGGGGCG
Get precursor sequence
|
Structure | 10 20 30 40 50
GCAGGACUGUGACACUAAA C--| C UU GAGAU
CACAG GGG GCUCAAUAAAUG UGUUGAAUU \
GUGUC CCC CGAGUUAUUUAU GCAACUUAA G
GCGGGGUGUGUCGCAGACC UCA^ A GG AUCGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Star sequence |
Bta-Mir-95_5p* |
mirBase accession | None |
Sequence |
0- CUCAAUAAAUGUUUGUUGAAUU -22
Get sequence
|
Mature sequence |
Bta-Mir-95_3p |
mirBase accession | MIMAT0009387 |
Sequence |
35- UUCAACGGGUAUUUAUUGAGCA -57
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-95
|