| MirGeneDB ID | Laf-Mir-95 |
|---|
| Family name |
MIR-95 (all species) |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-95
Cfa-Mir-95
Cja-Mir-95
Cpo-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Mml-Mir-95
Mmr-Mir-95
Pab-Mir-95
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010045.1: 239252-239308 [-]
UCSC
Ensembl
|
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| Seed |
UCAACGG |
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Precursor
(pre-Mir +30nt flank) |
GUAGGACUGUGACACUCAACACCGUGGGCACUCAAUAAAUGUUUGUUGAAUUGAGAUGCAUUGAAUUCAACGGGUAUUUAUCGAGCACCCACUCUGUGCCAGACUCUGUACUAGGUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUAGGACUGUGACACUCA--| CC CA A UU GAGAU
ACA GUGGG CUC AUAAAUG UGUUGAAUU \
UGU CACCC GAG UAUUUAU GCAACUUAA G
GUGGAUCAUGUCUCAGACCG^ CU AC C GG GUUAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Laf-Mir-95_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CUCAAUAAAUGUUUGUUGAAUU -22
Get sequence
|
|---|
| Mature sequence |
Laf-Mir-95_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UUCAACGGGUAUUUAUCGAGCA -57
Get sequence
|
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