MirGeneDB ID | Cja-Mir-95 |
Family name |
MIR-95 (all species) |
Species |
White-tufted-ear marmoset (Callithrix jacchus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-95
Cfa-Mir-95
Cpo-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Laf-Mir-95
Mml-Mir-95
Mmr-Mir-95
Pab-Mir-95
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021917.1: 184460021-184460077 [-]
UCSC
Ensembl
|
Seed |
UCAACGG |
Precursor (pre-Mir +30nt flank) |
GUAGGAUUGUGACACUCAACACAGUGGGCACUCAAUAAAUGUCUGUUGAAUUGAAAUGCGUUACAUUCAACGGGUAUUUAUUGAGCACCCACUCUGUGCCAGACGCUGAGUGUGGCG
Get precursor sequence
|
Structure | 10 20 30 40 50
GUAGGAUUGUGACACUCA--| C CA GU UGAAAU
ACA AGUGGG CUCAAUAAAU CUGUUGAAU \
UGU UCACCC GAGUUAUUUA GGCAACUUA G
GCGGUGUGAGUCGCAGACCG^ C AC UG CAUUGC
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Cja-Mir-95_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CUCAAUAAAUGUCUGUUGAAUU -22
Get sequence
|
Mature sequence |
Cja-Mir-95_3p (predicted) |
mirBase accession | None |
Sequence |
35- UUCAACGGGUAUUUAUUGAGCA -57
Get sequence
|