MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-877

Family name MIR-877 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-877  Cfa-Mir-877  Cja-Mir-877  Ete-Mir-877  Hsa-Mir-877  Laf-Mir-877  Mml-Mir-877  Mmr-Mir-877  Mmu-Mir-877  Rno-Mir-877 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054684.2: 30638274-30638359 [+] UCSC Ensembl
Seed UAGAGGA
Precursor
(pre-Mir +30nt flank)		 
GAUGACACAGCUGCUGAGAGGCUAGAGAAGGUAGAGGAGAUGGCGCAGGGGACACGGGCAAAGACUCGGGGGUUCCUGGGACCCUCAGACAUGUGUCCUCUUCUCCCUCCUCCCAGGUGUAUGAGGAAUUGCGGGCCACUGGGGCG
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Structure
        10        20           30        40        50        60        70    
GAUGACACAGCUGCUGAGAGGCUAGAGAA---| UA      AU  CGC        CGGGCAAAGACUCGGGGGU 
                                GG  GAGGAG  GG   AGGGGACA                   \
                                CC  CUCCUC  CC   UCUCCUGU                   U
GCGGGGUCACCGGGCGUUAAGGAGUAUGUGGA^ --      --  UCU        GUACAGACUCCCAGGGUCC 
    140       130       120         110         100        90        80
Deep sequencing
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CommentMir-877 is a conserved mirtron cut at both ends by the spliceosome.
3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-877_5p
mirBase accessionNone
Sequence 
0- GUAGAGGAGAUGGCGCAGGGGACA -24
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Star sequence

Pab-Mir-877_3p* (predicted)
mirBase accessionNone
Sequence 
65- UCCUCUUCUCCCUCCUCCCAG -86
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