MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-877

Family name MIR-877 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-877  Cfa-Mir-877  Cja-Mir-877  Hsa-Mir-877  Laf-Mir-877  Mml-Mir-877  Mmr-Mir-877  Mmu-Mir-877  Pab-Mir-877  Rno-Mir-877 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980348: 10660639-10660723 [+] UCSC
Seed UAGAGGA
Precursor
(pre-Mir +30nt flank)		 
GACGACGCGGCUGCCGAGCGGCUGGAGAAGGUAGAGGAGAUGGCGCAGGGGACACGGGCGGAGACUGGGGCUGGCUGGGGUCCUCCAACAUGUGUCCUCUUCUCCCUCCUCCCAGGUGUAUGAGGAGUUGCGAGCCACAGGGGCG
Get precursor sequence
Structure
        10                 20        30        40        50        60        70   
GACGACGCGGCUGCCGA---------|  G    A  A  U  A     UGGCGC        CGGGCGGAGACUGGGGCU 
                          GCG CUGG GA GG AG GGAGA      AGGGGACA                  G
                          UGU GACC CU CC UC CCUCU      UCUCCUGU                  G
GCGGGGACACCGAGCGUUGAGGAGUA^  G    -  -  -  -     ------        GUACAACCUCCUGGGGUC 
   140       130       120        110                100        90        80
Deep sequencing
Go to detailed chart
CommentMir-877 is a conserved mirtron cut at both ends by the spliceosome.
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Ete-Mir-877_5p
mirBase accessionNone
Sequence 
0- GUAGAGGAGAUGGCGCAGGGGACA -24
Get sequence
Star sequence

Ete-Mir-877_3p* (predicted)
mirBase accessionNone
Sequence 
64- UCCUCUUCUCCCUCCUCCCAG -85
Get sequence