| MirGeneDB ID | Pab-Mir-574 |
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| Family name |
MIR-574 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-574
Cfa-Mir-574
Cja-Mir-574
Cpo-Mir-574
Dno-Mir-574
Eca-Mir-574
Ete-Mir-574
Hsa-Mir-574
Laf-Mir-574
Mml-Mir-574
Mmr-Mir-574
Mmu-Mir-574
Ocu-Mir-574
|
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 38218608-38218665 [+]
UCSC
Ensembl
|
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| Seed |
ACGCUCA |
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Precursor
(pre-Mir +30nt flank) |
GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCUGGGUCCACGCUCAUGCACACACCCACACGCCCACACUCAGGGUCUGCCCCCUCGGCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGCCGAGGGCCCUGCGU--| C AGU UGUCGC
GGGUG GGGCGUGUG GUGUGUGUGUGAGUGUG U
CUCAC CCCGCACAC CACACACGUACUCGCAC C
CCGGCUCCCCCGUCUGGGA^ A C-- CUGGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-574_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
|
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| Mature sequence |
Pab-Mir-574_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CACGCUCAUGCACACACCCACA -58
Get sequence
|
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