MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-574

Family name MIR-574 (all species)
Seed ACGCUCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-574
Paralogues
Orthologues Bta-Mir-574  Cfa-Mir-574  Cpo-Mir-574  Dno-Mir-574  Ete-Mir-574  Hsa-Mir-574  Mml-Mir-574  Mmu-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chr2: 28270671-28270728 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCCGAGGGCCUGCGAGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCACGCCGGGUCUGCACCCUCGGCC
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Structure
        10          20        30        40        50         
CGGCCGAGGGCCUGCGA-  -|            AGU                 UGUCGC 
                  GG GUGCGGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                  CC CACGCCCGCACAC   CACACACGUACUCGCAC      C
CCGGCUCCCACGUCUGGG  G^            C--                 CUGGGC 
      110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Star sequence

Ocu-Mir-574_5p*

mirBase accessionMIMAT0048531
Sequence
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
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Mature sequence

Ocu-Mir-574_3p

mirBase accessionMIMAT0048532
Sequence
36- CACGCUCAUGCACACACCCACA -58
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